Detailed information on CNT30167792


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021628Pistacia veraCitrullus lanatus40.7956.7289.63135forward
CNT30199403Pistacia veraPisum sativum82.7815.1389.42274forward
CNT30491131Pistacia veraOlea europaea78.259.7189.19259forward
CNT30194074Pistacia veraSecale cereale81.8728.2387.08271forward
CNT30224362Pistacia veraHordeum vulgare81.8717.0787.08271forward
CNT301761Pistacia veraZea mays81.874.7888.19271forward
CNT30688863Pistacia veraTriticum urartu81.8712.8987.45271forward
CNT30365705Pistacia veraSorghum bicolor81.8751.0486.72271forward
CNT30430934Pistacia veraPapaver somniferum80.974.190.3268forward
CNT3054267Pistacia veraAmborella trichopoda42.919.1486.62142forward
CNT30585620Pistacia veraEchinochloa crusgalli81.875.2888.56271forward
CNT30115505Pistacia veraOryza nivara38.6730.0588.28128forward

Expression of CNT30167792

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MKNRKTELPGMPVPIKNRGSCWWNQKLDNVMFNKLNG

Sequence

>CNT30167792
TCCACCCAGAACGTAATGGGTGACTCCTACAACACGTCCTTGTACAATGCTCAAGGCTCTAGGCTTTAGGCTGAGTAGCAGGAGCAACCTTTAATTTATT
ATGAGCCCAAACAATGGATTCAATAAGTTCTTGCCAATAACCACGCTTGCTGAATAGAAACATTAAACTAAAAGCCCATACAAATTGAGCACCTAGAAAA
AAAAGGCCATATACAGATAATGAAGAACCGTAAGACTGAATTACCTGGGATGCCTGTGCCCATAAAAAATCGCGGATCCTGCTGGTGGAACCAAAAGTTA
GATAATGTTATGTTCAATAAGCTCAACGGCC