Detailed information on CNT30199347


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30499788Pisum sativumCoffea canephora12.1822.2210072forward
CNT30403020Pisum sativumBeta vulgaris12.3526.7410073forward
CNT30611088Pisum sativumArabis alpina12.0120.9498.5971reverse complement
CNT30653503Pisum sativumRosa chinensis13.3731.2310079forward
CNT30214655Pisum sativumHelianthus annuus13.3736.4198.7379forward
CNT30342067Pisum sativumEragrostis tef11.5120.1886.7668forward

Expression of CNT30199347

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MNDEILLDMDIKNKSCPLVSDDIYRQIRGHLV*

>peptide 2 (42 aa)
QKKNWASSISVIGINNLSGLNEAFDSAAFHCLRDSSSLTPYS*

>peptide 3 (29 aa)
MRNWGHRQKSKCSINLSIVGLALLHQSGF*

Sequence

>CNT30199347
CAGAAAAAAAATTGGGCTTCTTCTATCTCAGTTATAGGTATTAATAATTTGTCGGGTTTGAATGAGGCATTTGATTCAGCAGCATTCCACTGTCTGAGGG
ATAGTTCCTCACTAACACCATATTCTTGAAGCTTAGTAATTAGAAAACTGTAGTTTAGCGGAAACGATAACTCGAGTATAGTATCGCAAAAATTCTTGTT
TTATTATTAATCTACTGAATGGTGTTAGTTCCCTGACATCACTCCTATCTTTCTTAGTTAGCAGCATTCCACTGTATGAGGAATTGGGGGCATAGACAGA
AATCCAAGTGCAGCATCAATCTCAGCATTGTTGGGCTTGCATTGCTTCATCAAAGTGGTTTCTGATTCTTGATCAGAATGAATGATGAGATCCTATTGGA
TATGGATATCAAAAATAAATCTTGTCCACTTGTTAGTGATGACATATATAGGCAAATAAGAGGGCATTTGGTCTAGTGGTATGATTCTCGCTTTGGGTGC
GAGAGGTCCCGAGTTCGATTCTCGGAATGCCCCCTTTTGAAGCTGTGGAAGTTTGACATTGTTAATTGTTTAATTCAATATGAATAAGCTA