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Detailed information on CNT30184713


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENW2|YCF3_SACOF, E-value = 2e-85

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689225Secale cerealeTriticum urartu56.9423.6898.57279forward

Expression of CNT30184713

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MDQQPNHPFYEKEGAWSYSNSKRFIIFNQFCASI*

>peptide 2 (48 aa)
MVLFKFKALHNLQPVLCFNIISRSKRCSLFPIFSSLIKPSFHNFRITL*

Sequence

>CNT30184713
TGGATATAATGAAATTCTTGATTCGATCTTACGACCTAATTTATTTGATTAATGGATCAACAACCAAACCACCCATTTTATGAAAAAGAAGGAGCATGGT
CTTATTCAAATTCAAAGCGCTTCATAATCTTCAACCAGTTCTGTGCTTCAATATAATTTCCCGGAGTAAGCGATGTAGCTTGTTTCCAATATTCAGCAGC
TTGATCAAACCAAGCTTCCACAATTTCCGAATCACCCTGTAGAATGGCCTATAGTCGCACGTAATGACAGATCACGGCCATATTATTAAAAGCTTGCGGT
AAGAAGGGGTTTCGTTCTAGTGCCCGGAAATAATATTCCAAAGCCTTTGTATGCTCTCCATTGCTTGTGTGTATAAGGCCTATGTTATAGAGTATATAAC
TTCGATCATAGGGATCGATTTCTAGTCGTGTAGCTTCATAATAATTTTGCAAAGCTTCCGCATAATTTCCTTCGGATTGAGCCAACATCC