Detailed information on CNT3018234


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6L391|RBL_SACHY, E-value = 8e-63

BLAST vs NONCODE:
NONORUT000578, E-value = 7e-122

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30627897Zea maysDaucus carota22.165.4589.0282forward

Expression of CNT3018234

Peptides detected in this lncRNA

>peptide 1 (49 aa)
IISLPSRARSRPSLRACTQASKATRLAAAPVLSEKDTARTIFFNKIIAQ*

Sequence

>CNT3018234
GATAATTTCATTACCTTCACGAGCAAGATCGCGCCCTTCGTTACGAGCTTGTACACAGGCTTCTAAAGCCACACGATTAGCTGCTGCACCAGTCCTGAGT
GAAAAAGATACCGCGAGAACGATCTTTTTCAATAAAATCATCGCGCAATAAATCAACAAAACCTAAAGTTATTTCGCGTTCCCCTTCTAACTTACCTACT
ACTGTACCGGAGTGGATATGATCTCCCCCCGACATACGCAATGCTTTAGCTAATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCAT
GCATTGCTCGGTGAATGTGAAGAAGTAGGCCGTTGTCGCGGCAATAATGAGACAAAGTAGTATTTGCGGT