Detailed information on CNT30181660


BLAST search results

BLAST vs Swiss-Prot:
sp|P25249|CYSP1_HORVU, E-value = 3e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099546Secale cerealeOryza rufipogon36.4610.1886.67105forward

Expression of CNT30181660

Peptides detected in this lncRNA

>peptide 1 (94 aa)
PRLLWEWTKWALDLKVPKRRCFSAWWRGTRCAVCHRSYRSHNASSDSRSLSSSGMALHSSTAATSSTAATMDATRSFLLSCPIVLLFYQYTTSCS

>peptide 2 (64 aa)
AALVVGVDEVGVGLEGAEAAVLLGVVAGHAVRGLPPLVQVPQRLLRLQVVVLQRDGAAQLHRRH*

Sequence

>CNT30181660
CGCCGCGCTTGTTGTGGGAGTGGACGAAGTGGGCGTTGGACTTGAAGGTGCCGAAGCGGCGGTGCTTCTCGGCGTGGTGGCGGGGCACGCGGTGCGCGGT
CTGCCACCGCTCGTACAGGTCCCACAACGCCTCCTCCGACTCCAGGTCGTTGTCCTCCAGCGGGATGGCGCTGCACAGCTCCACCGCCGCCACTAGCAGC
ACCGCCGCCACCATGGACGCCACCAGAAGCTTCTTGCTAAGCTGCCCCATAGTGCTGCTGTTCTACCAGTACACAACAAGCTGTAGTG