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Detailed information on CNT30181113


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30287498Secale cerealeTriticum aestivum41.5227.6289.87316forward
CNT30386082Secale cerealeTriticum turgidum41.5240.0590.19316forward

Expression of CNT30181113

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MRWCRGGWRRGWQRRCGRRSSAGSSSASPSPATSHANSGAAISPSKTDRVRHGRRRRTDSASTGQED*

>peptide 2 (43 aa)
MVPWRMEARLAATVRAALLGWLFFCLTVASDVARQLRSSDLSV*

>peptide 3 (38 aa)
MLPVNFHLKHVVPLLILGGHHGYFQTSITDYHLRYSLF*

>peptide 4 (40 aa)
MAGGEEPTLRLQGKKIDLQQGNQMLFCGVLDPQLGASARL*

Sequence

>CNT30181113
CTATGACGTGCTGCTACTCGAAGAGGATGGTGAAGAACTGAAGATTCATGCCCCTTAAGAGCAGACAGGAAGAAGGTTCTACCTCATCAAGGGAGCTGCT
TGCAGAAGCGAGGTAGTGGTGTTCTTGGATGCGATGGTGCCGTGGAGGATGGAGGCGCGGTTGGCAGCGACGGTGCGGGCGGCGCTCCTCGGCTGGCTCT
TCTTCTGCCTCACCGTCGCCAGCGACGTCGCACGCCAACTCAGGAGCAGCGATCTCTCCGTCTAAGACCGACCGCGTTCGACATGGCCGGCGGCGAAGAA
CCGACTCTGCGTCTACAGGGCAAGAAGATTGATTTGCAGCAGGGTAACCAGATGTTATTTTGCGGTGTGTTGGACCCGCAGTTAGGTGCAAGTGCTCGTC
TTTAGAAGACGGTTGTCCTTAAGACTCAGATGCTCCCTGTAAATTTTCATCTAAAGCATGTTGTTCCTTTGCTTATTTTGGGGGGTCATCATGGTTACTT
CCAAACTAGCATCACTGACTACCACCTGAGATACTCTCTTTTTTAGGGAACCACCTGAGATATACTTTTTTTTAGAGAACCACCTGAGATACTTAATAAA
TCATTACTCCTTAACGGTTTCATCAATTGTTCCCTAACTGGAAAACCCATTAGGGGGGTCTAGATCCACTTTTGATCTGAAATGTAGGTCCCATGATGAG
ATGGCCTGGCAAATCATCATTGTCGTCGGCCTTACGTTGGCAAAACCGCCCTCTAAATCAC