CANTATAdb - search

Detailed information on CNT30179559

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET008651, E-value = 4e-41

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30391596	Secale cereale	Triticum turgidum	29.09	29.42	93.46	153	forward
CNT30442508	Secale cereale	Aegilops tauschii	28.71	14.83	96.69	151	forward

Expression of CNT30179559

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MAHNNWSWLISFLSILGLILNSKKSTHVFLRHRCYYIITNMSYLKSGPINDNFTIRLHIYLITRKKITSCRITDT*

>peptide 2 (44 aa)
QTTCYFPWTIVSHTMCHPPTLVSFISSKELGLLLVWLPQPLIPH*

>peptide 3 (35 aa)
MMHCLKEICPKGNNKVVICISLYHGKCLLFMLELY*

Sequence

>CNT30179559
CAAACGACATGTTATTTTCCATGGACAATCGTCAGCCATACAATGTGCCATCCACCTACTCTTGTTAGCTTTATAAGTTCCAAGGAACTTGGTCTTTTAC
TGGTATGGCTCCCTCAGCCATTAATTCCTCACTAACATGGCACACAACAACTGGAGCTGGCTCATTTCGTTCTTGAGCATCCTCGGCCTCATCCTCAATT
CCAAGAAAAGCACACATGTTTTCCTCAGACATAGGTGCTATTACATCATCACAAACATGAGTTATCTCAAAAGTGGACCAATCAATGACAACTTCACCAT
CAGATTGCACATATATCTGATTACTAGGAAGAAAATTACAAGTTGCAGAATCACTGATACATGATGCACTGCTTGAAGGAAATATGCCCTAAAGGCAATA
ATAAAGTTGTTATTTGTATTTCCTTATATCATGGTAAATGTTTATTATTCATGCTAGAATTGTATTAACCGGAAACTTAGTACATGTGTGAATACATAGA
CAAAACAGAGTGTCCCAAGTATGCCT