Detailed information on CNT30177379


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30704384Secale cerealePrunus avium21.057.990.9144forward

Expression of CNT30177379

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MLGAQCQGSGGRCHRWRSEPRPEPVPPPTALKTRNPWRPVQLSESFLMRSRHRSTISLP

>peptide 2 (40 aa)
LRNKPVEVGVCWALNVKGAAADVIDGEANQGQSQFHLQQR*

Sequence

>CNT30177379
ACCTGAGAAACAAGCCTGTTGAGGTTGGTGTATGTTGGGCGCTCAATGTCAAGGGAGCGGCGGCAGATGTCATAGATGGAGAAGCGAACCAAGGCCAGAG
CCAGTTCCACCTCCAACAGCGTTGAAGACAAGGAATCCCTGGAGACCAGTGCAGTTGTCTGAAAGCTTCCTGATGCGGTCAAGGCATAGATCAACAATCT
CCTTGCCAA