Detailed information on CNT30177310


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005619, E-value = 1e-120

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697664Secale cerealeOryza sativa61.0696.7291.7265forward
CNT30283743Secale cerealeTriticum aestivum100.2338.2698.85435reverse complement
CNT30243901Secale cerealeAvena sativa62.6798.5596.32272forward
CNT30340077Secale cerealeEragrostis tef89.8682.9894.87390forward

Expression of CNT30177310

Peptides detected in this lncRNA

>peptide 1 (29 aa)
QRSLLCNEHNRSYCKINVLLHRFERIGEQ*

Sequence

>CNT30177310
TCAAAGGAGCTTATTATGCAATGAACATAATCGATCTTATTGCAAAATCAATGTCTTACTTCATAGATTCGAGAGAATAGGAGAACAGTAGCCTGACAAA
CAGTCGGTTCAGTCCGATTCAGGTGTCAATTCAGGTGCCTAATCAAATAGAACCCTTATGGATTTGCTAGTTGATAAGGTAAATATCCAGCCCACTAAAT
GCTAGGCGTAATGAGGATAAGGGCCTCCAAAAAACTTCTTTTCGTTCTATGAGCTTTAAGGTGTATGAAGTCTCATAGTTAACTCTTGCAGTGGAACGAT
AGAGACTCCATTTCACTTAGGTTGATTTAATTTAGACCGGAGGCAGACCTAAGTCAAGGTAATCCTCCTTTGAAACACTTTGGTATTGCTCCTAGATAGA
TCATAATACAAAAAATCAATCAGAGCACAGGGAG