Detailed information on CNT3017474


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3061108Zea maysArabidopsis lyrata17.6824.0289.0955forward

Expression of CNT3017474

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MGSPQFVALDPGTCTTIDIHTTLLPPLGLQAIAICS

>peptide 2 (47 aa)
QQKDSGLPERAHVPQLAYSIGAHYPSTAGGGRYSLLYETSLTQCPPL*

>peptide 3 (32 aa)
MKPASRNVRHFRCWDAKAFAKAPETHYITWNG*

Sequence

>CNT3017474
ACAGCAAAAAGATAGTGGTCTACCAGAGAGGGCACATGTGCCTCAATTGGCCTATAGCATAGGGGCTCATTATCCTTCCACCGCTGGTGGCGGGCGGTAC
TCGCTGCTCTATGAAACCAGCCTCACGCAATGTCCGCCACTTTAGGTGTTGGGATGCAAAGGCTTTCGCCAAGGCACCCGAAACCCACTACATAACTTGG
AATGGGTAGTCCACAGTTTGTAGCACTAGACCCAGGCACATGCACCACAATTGACATCCACACTACCTTATTGCCCCCGCTCGGGTTACAAGCAATCGCT
ATTTGCTCAGC