« Back to Vigna angularis search


Detailed information on CNT30174532


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4H1G4|METK1_BETVU, E-value = 4e-98

BLAST vs NONCODE:
NONPOPT000587, E-value = 1e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712013Vigna angularisGlycine max47.2383.8990.93375forward

Expression of CNT30174532

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFTRTLQLSASSPTSSEMKPMFLQVSRTIFS*

>peptide 2 (45 aa)
MLALVVISPKTMTKLVLVHVSQATLLSGSCSRQASRTASEIWSQSL

>peptide 3 (60 aa)
RPEGFKWKMVFSSRYFSGITGLITCSFRSAAISSFVTVSSCCVEMSTVWTRTGTMAPLSL*

>peptide 4 (89 aa)
TARGVQVENGLLIKVLLGNHGLDHVLFQISSNFIIRDSLVMLCGDEHGVDTNWNHGTLVIVILNSHLGLAIRSEPRAGTVLPNLSETSP*

Sequence

>CNT30174532
ACGGCCAGAGGGGTTCAAGTGGAAAATGGTCTTCTCATCAAGGTACTTCTCGGGAATCACGGGCTTGATCACGTGCTCTTTCAGATCAGCAGCAATTTCA
TCATTCGTGACAGTCTCGTCATGTTGTGTGGAGATGAGCACGGTGTGGACACGAACTGGAACCATGGCACCCTTGTCATTGTAATACTCAACAGTCACTT
GGGTCTTGCCATCAGGTCTGAGCCAAGGGCAGGTACCGTTCTTCCGAACCTCAGTGAGACGAGCCCCTAGTTTGGTTGCGAGGACGTGGCTCAAGGGCAT
CAATTCAGGGGTCTCGTCGGTGGCATAGCCGAACATGTGACCCTGGTCGCCGGCACCGATTTCTTCAGGTCTTTTGGTGAGGTGGCCATGCACGCCCTGG
GCAATATCAGGACTCTGTTGCTCAATGGCATCAATTCAGGGGTCTCGTCGGTGGCATAGCCGAACATGTGACCCTGGTCGCCGGCACCGATTTCTTCAGG
TCTTTTGGTGAGGTGGCCATGCACGCCCTGGGCAATATCAGGACTCTGCTGCTCAATGTTCACAAGGACCTTGCAGTTGTCGGCATCAAGTCCCACATCG
TCTGAGATGAAGCCGATGTTCCTGCAGGTGTCACGCACGATCTTCTCGTAGTCAATGTTGGCCTTGGTGGTGATTTCTCCGAAGACCATGACCAAGTTGG
TTTTGGTGCATGTCTCACAAGCAACCTTGCTCTCTGGATCTTGCTCAAGGCAGGCGTCAAGAACAGCATCGGAGATTTGGTCGCAGAGCTTGTC