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Detailed information on CNT30168613


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FFD8|MBS2_ARATH, E-value = 2e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30348261Pistacia veraEragrostis tef19.6333.183.3396forward
CNT30726674Pistacia veraLupinus angustifolius29.8622.4680.14146forward

Expression of CNT30168613

Peptides detected in this lncRNA

>peptide 1 (85 aa)
DLRVTSIVMNLHRLEIRRRRFAEGAFVLGVPSLLNTCPIGHPRLAPAAIGGGGVHLHGYLLRRVLLGLRLAGHDGEGIGCTAVMG*

Sequence

>CNT30168613
GGGATCTTCGGGTGACGAGCATCGTGATGAATCTTCATAGACTTGAGATCAGGCGCCGTCGTTTTGCAGAGGGGGCATTCGTACTTGGCGTGCCCTCCCT
TCTCAATACCTGTCCTATCGGCCATCCCCGCCTTGCCCCCGCCGCGATTGGTGGTGGCGGCGTCCACCTTCATGGCTATCTCCTTCGCCGTGTGCTTCTT
GGGCTTCGCCTTGCCGGTCATGATGGTGAGGGGATTGGATGCACGGCTGTGATGGGGTGAACCAGAGGAGAAAAGGAAGTGAAATTTCGGAAGAAACCCT
ATTTAGTTTTATATATATATAACTAAATAGGATTGTTTGGGCTTATCTGTTTTCCGCGTTAGATTGAGTGGGTGCTTTGTTTTTTTTCGTTGGGAATTTT
TATATAATTATCGTTTGAGAAAAATCCTTTTCAGAGTCTTACAACGTTACGAGATTCTGGTTTGGCGGTGATTATCCAGGGAGATATTT