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Detailed information on CNT30163293


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LT78|RD21C_ARATH, E-value = 1e-40

BLAST vs NONCODE:
NONTCAT002529, E-value = 5e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30609330Pistacia veraGossypium raimondii39.9140.0986.26182forward

Expression of CNT30163293

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MNNSHRSGSNQRIHIGNNMSHHLGNMRSPHIHLVKAREVVGMVEVVVAVVKRELVQMILWSDKRPLH*

Sequence

>CNT30163293
AGCCCTTCTTCCACATCGCAAATAGGATAATCACTGGGGCAGCAGTACTCAGTTCCAGTACAGCACACAGCATTTTCATATGAACAACAGCCATAGATCA
GGCAGTAATCAAAGAATTCATATAGGCAACAACATGTCTCATCACTTGGGCAATATGAGAAGTCCCCACATTCACTTGGTGAAGGCGAGGGAGGTGGTGG
GGATGGTGGAGGTGGTGGTGGCGGTGGTGAAGAGGGAGCTGGTGCAGATGATTCTTTGGTCGGATAAGAGGCCATTGCATTGACCGCACATTCACCATAT
TCTAAGTCTGTGTTCCTTTTAAGGTAGAAATATCCGTCCATTCCCCAACTTGTTCCCCAAGAATTCTTTACAATCCAATAATCTTCATCATCTTCAGAAC
CATAACCAACAATCAAAACTGCATGATCAATCTCATCTGGATCGTCTGAGCAGTCA