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Detailed information on CNT30151758


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3080945Brachypodium distachyonBrassica juncea10.0632.1491.6772forward
CNT3058692Brachypodium distachyonAmborella trichopoda15.0827.9890.74108forward

Expression of CNT30151758

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MNLYQTLKQCYKTRTSGELDVLNRNSCQISNV*

>peptide 2 (31 aa)
MGANPLESTVVASKWANVVAGAGSVKSSAGT*

>peptide 3 (29 aa)
MLWQEQGQSNRPQVHKPLGSKLTTYSTLG*

Sequence

>CNT30151758
TTCTATACCCATATTAGCTTGACTAAGCGAAAGAAATAGGGCCATCTCGAGAATAAGGAAGTCTGAACTTCGCTGATCCGAAACAGGAAGGGTGCCATAT
TACTTGATTTAGGGGAAGTCTTGCTTGTCTCCTCCAATCCTAAAAGGGAATGTGGGTCCAGTTTCCCAAGAATAAGAAGAAAAAAGCTAGGAGATGATGG
GTTTGTTTGCTAAGTAGGTTATGAAGCCCTTACTTGGTAAGATAAGTAGTCCTATTTCCCATCCCTTCGTTTGCTAAGTAGGTCAATTGGGCCAAAGCAG
AAGCAGAATAGAGAGCAATGGGAGCTAATCCTCTGGAAAGTACGGTAGTAGCATCCAAATGGGCAAATGTTGTGGCAGGAGCAGGGTCAGTCAAATCGTC
CGCAGGTACATAAACCGCTTGGATCGAAGTTGACAACCTACTCCACACTGGGTTGAATGCATGAATCTGTATCAAACACTAAAGCAGTGTTATAAAACCA
GAACCAGTGGAGAATTAGATGTTCTGAACAGAAATAGTTGTCAAATTTCTAACGTTTAGAATTGACCAGTAAACAACCTATGTCACGAGAGAAACTTGTT
AAGGGCCATCTGTAGAGAGAGGGTATATGTGGCTCTAAAGCCTTATGTTTGCCTTGTCCTTACTAACACTATGCACTGGATTCAAGCTCACATAACCTAA
TACTTTATTACGGAGT