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Detailed information on CNT3058692


BLAST search results

BLAST vs Swiss-Prot:
sp|Q70XZ6|ATPB_AMBTC, E-value = 3e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379737Amborella trichopodaManihot esculenta26.942.2289.42104reverse complement
CNT30526003Amborella trichopodaPhaseolus vulgaris34.7213.6991.04134forward
CNT30197557Amborella trichopodaPisum sativum105.1826.1986.95406forward
CNT3082983Amborella trichopodaBrassica juncea45.857.3789.83177forward
CNT3018154Amborella trichopodaZea mays44.31591.23171forward
CNT30416813Amborella trichopodaPapaver somniferum55.449.5993.46214forward
CNT30645933Amborella trichopodaCannabis sativa45.618.6489.77176forward
CNT30151758Amborella trichopodaBrachypodium distachyon27.9815.0890.74108forward
CNT30116966Amborella trichopodaOryza nivara52.595.6791.63203forward
CNT30726985Amborella trichopodaLupinus angustifolius55.449.8993.93214forward

Expression of CNT3058692

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MCKCRGRSRVGQIVCRYINCLNGSYGSLFSRSNSFLQRTHFCTKGRLITHGRSTSCSLTSRKYSAIVRAVKPTLIRAPGGSFI*

Sequence

>CNT3058692
GCTGGATAGATACCTTTGGCGGCTAATCCTCTTGATAGTACGGTAGTAGCATCTAAATGTGCAAATGTCGTGGCAGGAGCAGGGTCGGTCAAATCGTCTG
CAGGTACATAAACTGCTTGAATGGAAGTTATGGATCCCTCTTTAGTAGAAGTAATTCTTTCTTGCAAAGAACCCATTTCTGTACTAAGGGTAGGTTGATA
ACCCACGGCAGAAGTACGTCTTGCTCATTAACATCACGGAAATATTCCGCCATTGTTAGGGCAGTTAAACCAACTCTCATCCGAGCTCCCGGCGGTTCAT
TCATCTGACCATAGACTAGAGCGACTTTTGATTCTGCAATATTTTGTTCATTAATCACTCCGGATTCTTTCATTTCCATGTAAAGA