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Detailed information on CNT30146625


BLAST search results

BLAST vs Swiss-Prot:
sp|P00869|RBS2_PEA, E-value = 2e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30196843Medicago truncatulaPisum sativum19.7947.0689.29224forward

Expression of CNT30146625

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MNLVNIRCVCNETDALNLTNVVESDDTDKGIRVSNNNFIKLLQHLRSISCSKQRQLPHCPVTSVIISW*

>peptide 2 (42 aa)
MVEGIRVSNNNFIKLLQHLRSISCSKQRQLPHCPVTSVIISW*

Sequence

>CNT30146625
AAGGATTGTAATTATATGTGCCGTGTCGGTATTAGACACCAACGATGTCGCAGAACAAGGAAAACTACATAGATAATGGATTCTTTTAAGTAACTTGGGA
ATTAAGTAACCATTTCATTCATTAACTCTTAATCTTATACATCCCATTTTTCAAATCCAAAAACAGAAATATAAAAACACAGAAGGAAAACATTTCCCTG
AAAAAGAAATGGAAATTAAAAGCAAAACATAAATGGGAAGAAGAAAAAAGTTCTTCCAAATTCCAGTGCAATGAACTTAGTAAACATCAGGTGTGTGTGC
AATGAAACTGATGCATTGAACTTGACGAACGTTGTCGAATCCGATGATACGGACAAAGGCATTAGGGTAAGCAACAACAACTTCATCAAGCTCCTTCAAC
ACTTGAGAAGCATCAGTTGCTCCAAACAAAGGCAACTTCCACATTGTCCAGTAACGTCCGTCATAATATCCTGGTGAACTGTGGTTCTCACGGTACACAA
ATCCTTTCTGCAAGTAGATTAACCATGACAAACCGATTAACCATCTAAGTTCAAAACTATATATATGTTCGTTGAAAAGGCATTGAAAATAAATTAAAAC
TAGACCTCGGTCTCGAATTCCAAGCAAGCAACCCATCCCTTCCTTATAAGGTATTCAACTTCTTTCGCCAATTGTTCTCTGGTCAATGGTGGAAGGCATT
AGGGTAAGCAACAACAACTTCATCAAGCTCCTTCAACACTTGAGAAGCATCAGTTGCTCCAAACAAAGGCAACTTCCACATTGTCCAGTAACGTCCGTCA
TAATATCCTGGTGAACTGTGGTTCTCACGGTACACAAATCCTTTCTGCAAGTAGATTAACCATGACAAACCGATTAACCATCTAAGTTCAAAACTATATA
TATGTTCGTTGAAAAGGCATTGAAAATAAATTAAAACTAGACCTCGGTCTCGAATTCCAAGCAAGCAACCCATCCCTTCCTTATAAGGTATTCAACTTCT
TTCGCCAATTGTTCTCTGGTCAATGGTGGAAGATATGAAAGAGTCTCAAACTTCTTCTTGCCAATAGGAGGCCACACCTAAAATTGCACAAAATGGTTAA
CAAACTTGTGTGCATTTTTCAACGAATCTCTA