Detailed information on CNT3014289


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30456328Zea maysSaccharum spontaneum73.863.1882.93369forward

Expression of CNT3014289

Peptides detected in this lncRNA

>peptide 1 (81 aa)
LLLTPLSRGLVPYLSLCVPTRPCVPELGFRPQVHGIQGRWLRVAATARQCRRIIAAADGRPRGGRLVPLRFVSCPKIDERA*

>peptide 2 (90 aa)
MEFRADGFGWPPPQGNVAESLPPPMGDRGEVASSHFDSSRALRLMRELDTNVTEDLTMLMPNLLSCLKHDDPAIVKQAIANGTNLFVVVL*

>peptide 3 (36 aa)
MASGGRHRKAMSPNHCRRRWETAGRSPRPTSIRLVP*

>peptide 4 (30 aa)
MWLFANRYLLMNKSTIVVTTYYCDVTMVIG*

Sequence

>CNT3014289
TGTTGCTGCTTACTCCTCTCAGTCGTGGTCTCGTGCCCTACTTATCCCTTTGCGTGCCAACGAGGCCCTGCGTCCCTGAACTAGGGTTTAGGCCCCAGGT
CCATGGAATTCAGGGCAGATGGCTTCGGGTGGCCGCCACCGCAAGGCAATGTCGCCGAATCATTGCCGCCGCCGATGGGAGACCGCGGGGAGGTCGCCTC
GTCCCACTTCGATTCGTCTCGTGCCCTAAGATTGATGAGAGAGCTTGACACAAATGTCACAGAAGATTTGACTATGTTGATGCCAAATTTGTTGTCATGT
TTGAAGCATGATGATCCTGCGATTGTTAAGCAAGCTATAGCCAATGGAACAAATTTATTTGTTGTTGTATTATAAGAGATGAAACTACATGTGGTTATTT
GCAAACAGATATTTATTAATGAATAAATCCACTATTGTTGTAACTACATATTATTGTGACGTTACTATGGTCATTGGATGAAGCTACTTGTTTATATTAA