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Detailed information on CNT30124630


BLAST search results

BLAST vs Swiss-Prot:
sp|P20866|CB2_PHYPA, E-value = 4e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30148272Physcomitrium patensBrachypodium distachyon35.6911.1993.4106forward

Expression of CNT30124630

Peptides detected in this lncRNA

>peptide 1 (97 aa)
QVLQGTLPGDDGLHEETEHGEHGEAAILDLLHLQLSEASGVDGVGHITQRSTGDTVTLNGSHKDNLGSPDGQDALSVHKAGVTQVVETSLAEDLGSGL

>peptide 2 (41 aa)
FKFSKGPFPVTMACTKKPNMENMARRPFLISFTFNSAKPPG*

Sequence

>CNT30124630
TTCAAGTTCTCCAAGGGACCCTTCCCGGTGACGATGGCCTGCACGAAGAAACCGAACATGGAGAACATGGCGAGGCGGCCATTCTTGATCTCCTTCACCT
TCAACTCAGCGAAGCCTCCGGGGTAGATGGGGTCGGTCACATCACCCAAAGGTCCACCGGCGACACGGTAACCCTCAACGGCTCCCATAAGGATAACCTG
GGAAGCCCAGATGGCCAAGATGCTCTGAGCGTGCACAAGGCTGGGGTTACCCAAGTAGTCGAGACCTCCCTCGCTGAAGATCTGGGCTCCGGCCTTG