Detailed information on CNT3012457


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30451175Zea maysSaccharum spontaneum34.0237.991.57166forward

Expression of CNT3012457

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MYVARIQKNKNMQEMYCFVTEVVSDVVAIAESSSGNG

>peptide 2 (86 aa)
RAHGVQLLQCMNDGYACAVAKTNRSLLPTLKRKTDLESRRWVAREPSFVTNCALVDLKYCTCFDNGMLLPAFCISVESRIPAPPEA*

Sequence

>CNT3012457
CGCGCCCATGGTGTGCAGCTCCTGCAGTGCATGAATGATGGATACGCCTGCGCGGTGGCGAAGACGAATAGGTCGTTGCTGCCGACGCTGAAGAGGAAGA
CGGACCTGGAGAGCAGGAGGTGGGTCGCACGGGAGCCCAGCTTCGTGACCAACTGTGCCTTGGTGGACTTGAAGTACTGCACCTGCTTCGACAATGGGAT
GTTGTTGCCCGCGTTCTGCATTTCAGTGGAGTCGAGGATCCCAGCTCCTCCGGAAGCATAGCTGACACCGCTGCCACGAGCTGTGAGGACCAGACGGCCG
GTGCTAGGTGCCAACGACAGGTATGGCGGAGGACTAGACGCGAACCCCATGCTCTTTGCTGCACATCCATGCAAGCATGTATGTAGCGCGTATACAAAAA
AATAAAAACATGCAGGAAATGTATTGTTTTGTTACCGAGGTAGTCAGCGATGTTGTAGCCATTGCTGAATCGTCCAGTGGGAACGGAG