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Detailed information on CNT30121826


BLAST search results

BLAST vs Swiss-Prot:
sp|P20866|CB2_PHYPA, E-value = 4e-109

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3040649Physcomitrium patensMarchantia polymorpha69.4354.6682.96452forward

Expression of CNT30121826

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MGSVTSPRGPPATRYPSTAPISTTWHAQIAKML*

>peptide 2 (40 aa)
MRCWPRGPPSGRSSSPVAPFRSQSPARRIRTSRTSPIARS*

>peptide 3 (49 aa)
EPQSGCKSMADRHSRTRDMKKTCHYIQSRSSDSHGAIHLVFIHKSSSRG*

Sequence

>CNT30121826
GAACCGCAATCCGGCTGTAAATCGATGGCCGATCGTCATTCAAGAACAAGAGACATGAAAAAAACTTGTCACTATATACAATCTAGAAGCTCTGACTCGC
ACGGTGCCATTCATCTTGTTTTCATTCACAAATCTAGTTCCCGGGGGTGAAGTTGGTGGCGTAGGCCCATGCGTTGTTGGCCACGGGGTCCGCCAAGTGG
TCGTTCAAGTTCTCCAGTGGCCCCTTTCCGGTCACAATCGCCTGCACGAAGAATCCGAACATCGAGAACATCGCCAATCGCCCGTTCTTGATCTCCTTCA
CCTTCAACTCCGCGAAGGTGTCGGGGTCGTCAGCCAAACCCAAGGGGTCGAACGACCCTCCGGGATAGATGGGGTCCGTCACTTCGCCCAGAGGTCCTCC
CGCAACACGGTACCCCTCCACGGCTCCCATCAGCACCACCTGGCATGCCCAGATCGCCAAAATGCTCTGAGCGTGCACCAGGCTGGGGTTGCCCAGGTAG
TCCAGCCCGCCCTCGCTGAAGATCTGAGCTCCGGCCTTGAACCACACCGCCTCGCCGAACTTCACGCCGCTCTTGGCCAGCAGCTCCGGGGTCGGACGAC
AGTCCAGCGGTGTCCCACCCGTAGTCTCCAGCGAACTCGCCGTTCAGGTAC