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Detailed information on CNT3040649


BLAST search results

BLAST vs Swiss-Prot:
sp|P15195|CB23_POLMU, E-value = 2e-144

BLAST vs NONCODE:
NONBNAT002216, E-value = 3e-24

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30121826Marchantia polymorphaPhyscomitrium patens54.6669.4382.96452forward
CNT30648173Marchantia polymorphaRosa chinensis63.2430.1181.07523forward

Expression of CNT3040649

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MENMASLPFFSSFTFSSAKVSGSSAKFRGSNEPPG*

>peptide 2 (34 aa)
ARSVHRYNFDRQRRSSVNSITKLKTGLIISQEES*

>peptide 3 (29 aa)
MAHRAWITSSSRFLAKVSGSAESPAVSQP*

Sequence

>CNT3040649
CGCCCGCTCTGTTCATAGATACAACTTTGATAGACAACGTCGATCATCTGTCAATTCTATTACAAAACTGAAGACAGGTCTTATAATTTCACAAGAGGAG
TCTTGACGAGAAAGCTCACATGATTGGTTCGATCACACCGGGGTGGACTCACAGTCACTGGGAGTGCTCATCTAAAACTTGAAGTATCGGCTAATTGTCT
ATGATCCGGGGGTGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTCACAGTCGGGTCAGCCAAGTGGTCGGACAAGTTCTCGATCGGGCCCTTGCCGGTGAC
AATAGCCTGAACGAAGAATCCGAACATGGAGAACATGGCAAGTCTTCCGTTCTTCAGCTCCTTCACCTTCAGCTCGGCGAAGGTGTCTGGGTCCTCAGCC
AAGTTCAGGGGGTCGAATGAGCCTCCGGGGTAGATTGGGTCGACAACATCACCCAAGGGTCCTCCTGCCACTCTGTATCCCTCGATGGCTCCCATGAGCA
CGACCTGGCAGGCCCAGATGGCCAGAATGCTCTGCGCGTGGATGAGGCTCGAGTTGCCGAGGTAGTCCAGACCTCCCTCTGAGAAGATCTGCGATCCGGC
CTTGAACCATACTGCCTCGCCGAACTTCACTCCGTTCTTGGCCAGCAGCTCGGGGGTGACACATCCCAAAGCTCCCAACATGGCCCATCGGGCGTGGATC
ACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGATCGGCAGAGAGTCCGGCGGTGTCCCAACCGTAGTCACCGGGGAATTCACCGGTCAAGTAGCTTG
GGGTGGCACCGGAGAATGGGCCCAAGT