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Detailed information on CNT30120605


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-157

BLAST vs NONCODE:
NONGMAT000502, E-value = 8e-118

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019810Citrus clementinaCitrullus lanatus68.4751.0483.92684forward
CNT30380572Citrus clementinaManihot esculenta68.3769.8483.75683forward
CNT30726539Citrus clementinaLupinus angustifolius68.3771.8283.75683forward

Expression of CNT30120605

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MQGGFFLDVVIGQGAAVFQLLSGEDQPLLVGRDSLLVLDLGLHVIDRVGALDLEGNRLPG*

Sequence

>CNT30120605
ACCACTGCATAAAACTTGTTCAACAAAAGACGGAAACAGAGCACCATAACCCAAAAGCAACAAACTAATTCATGACGGAACCAACAATAACCCAACCAAA
CAAAGACACAAGCACAACTTAACAACCATCTCAGCATTCACCACCACGAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCA
AGGGTACGGCCGTCCTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTATCAA
TTGTATCAGAACTCTCCACCTCCAGAGTAATAGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCATGCCTCCACGGAGACGGAGGACAAGATGCAAGGT
GGATTCTTTTTGGATGTTGTAATCGGCCAAGGTGCGGCCGTCTTCCAATTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTG
TCTTGGATCTTGGCCTTCACGTTATCGATCGTGTCGGAGCTCTCGACCTCGAGGGTAATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCATGCCGC
CACGGAGCCTGAGCACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAGACG
CTGCTGATCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTT
AGGGTTTTCACGAAGATCTGCATATTGACAAAGGTTGTTTATCTAGCGAGCAAAGAGAGAGATTTTACAATTGTTTTGAGAGAGTAATGAGAATGATGAT
AATAAATTGAGCGCGTTGGGTTTATATAAGAAAGCCTAACCCTTGTCGAACGATTCAGATGGAGGGCGGATTCGTGGTACTAGAATGTAAAGGAATGGT