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Detailed information on CNT30120296


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381636Citrus clementinaManihot esculenta21.7418.884125forward

Expression of CNT30120296

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MKSRMMYPSLPHVSSMSDKIQQVQELVELYHHFPLLSASFLVEEVV*

>peptide 2 (42 aa)
TAKRNDDLFSISPIMLLLASDVLEVDEIKDDVSFFASRFINV*

>peptide 3 (31 aa)
MQDIFPLELLLLILTSTGMNLKQCSVSHWKKP

Sequence

>CNT30120296
ACAGCTAAAAGGAATGATGATTTGTTCTCAATCTCCCCAATCATGTTGCTCCTAGCATCTGATGTATTAGAAGTGGATGAAATCAAGGATGATGTATCCT
TCTTTGCCTCACGTTTCATCAATGTCTGATAAAATTCAACAAGTTCAGGAGCTCGTTGAACTTTATCACCACTTCCCACTCCTCTCGGCAAGCTTCCTGG
TGGAGGAGGTGGTCTAAACACTCTAGGAGGCCTCTTTTCAATTTGGGAAAATTTCATTTTGCTTATTGTTTGAGATTCAGCAGCCCTGTCATCATGTGAT
TGATCACTTGAATCACCAGAAACTATTGGCTTCTCTTTTAATAGAGCAAGTTTTGGTGGCAAGGTAGGGTGTTTGGAGTCAAAATTTGAATTGTCACGAA
ACCTGTAAGCTCTTGCTTTCTCTGCTTTTTCCTTAATTTGCTTCTCCCTTTCTAAGGCCAACTTGTGCCGGTCTTTGTATGCAGGATATTTTTCCGCTAG
AACTCCTTCTACTGATTTTGACATCAACTGGAATGAATCTGAAACAGTGTTCAGTGAGTCACTGGAAGAAACCCG