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Detailed information on CNT30108035


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370007Oryza longistaminataOryza glumipatula33.5450.9395.45110reverse complement

Expression of CNT30108035

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MDIPEEVLSRWESQREESDYWRLDSSHRLIPRCCSR*

>peptide 2 (37 aa)
MLKYMRSLEWTYLRRYFQGGSHKERNPTIGDLIAPIG*

>peptide 3 (39 aa)
GISGSTNSYNAVVRENAQLRHEVTEQRGMIREQRGMIQE*

Sequence

>CNT30108035
GGAATATCTGGATCTACGAATTCTTACAATGCTGTAGTGCGTGAGAATGCACAACTTCGCCATGAAGTGACTGAACAGCGTGGAATGATACGTGAACAGC
GTGGAATGATACAAGAATAGCGTGGAATGCTAAAGTATATGAGAAGCTTGGAATGGACATACCTGAGGAGGTACTTTCAAGGTGGGAGTCACAAAGAGAG
GAATCCGACTATTGGCGACTTGATAGCTCCCATCGGCTGATTCCGAGATGCTGCAGCCGATAATGACTCTAAGCCGATGACGTCTTTGCCGATTACCAAA
TTTCACTGTTAACAGGACTGTTCTGAGG