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Detailed information on CNT30103172


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30176977Oryza rufipogonSecale cereale30.7328.7897.46118forward
CNT30578014Oryza rufipogonOryza barthii23.725.7198.991reverse complement

Expression of CNT30103172

Peptides detected in this lncRNA

>peptide 1 (37 aa)
CRSHPRVEYILSLNLCSPMHSQYYSLTSPRRGISLPP*

>peptide 2 (36 aa)
MCPESGRDRRGPFVENFPFKEREVVPPKKKKEGSVLL

Sequence

>CNT30103172
TGCCGATCACATCCAAGGGTCGAATACATCCTGTCTTTGAACCTTTGTAGTCCTATGCATAGTCAGTACTATAGCCTCACTAGTCCTCGTCGAGGAATCT
CCTTGCCGCCCTAGAAGTTTGAGATCGTGCCCGACCGTTTTGGAGTCTGTTCAGGAGCTCCTTCAGCGCCCGGGGATTGACGTCGGACTGGAGTCGGCTC
AACATGAAATCAAGCATGGTGCGATAGTCTTCTTCATGGAGCTCCTCTCCATTCTTCAGAGTAATATCACGCAATGTGTCCAGAATCTGGGCGTGACAGG
CGCGGGCCTTTTGTAGAGAACTTTCCTTTCAAAGAGAGAGAGGTCGTCCCTCCCAAGAAAAAGAAGGAGGGTTCTGTTCTGCTT