Detailed information on CNT30103078


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30220178Oryza rufipogonHordeum vulgare97.715.4697.64382reverse complement

Expression of CNT30103078

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MTSSLKDHTLSRAGCRPRWSANLDFPWACLAPTSK*

>peptide 2 (43 aa)
WEWQHPHASFDETSPVASDQWLVNHRTVAPHRMPLRWGNTAHD*

Sequence

>CNT30103078
TGGGAATGGCAGCACCCACATGCATCATTTGATGAAACCAGTCCAGTCGCCTCCGATCAGTGGCTTGTCAACCACCGGACCGTAGCTCCTCACCGAATGC
CCCTGCGTTGGGGCAACACAGCACATGACTAGTTCGCTCAAGGACCACACCCTCTCGAGAGCAGGATGCCGGCCGAGATGGAGCGCCAACCTAGACTTTC
CTTGGGCTTGCCTTGCCCCAACATCTAAATAAAGGGCGGGCGCCGAAAAGGAAGCAGTGACGCCTTTTCGACGAAAGCTTAGCTTGGTAGGCGCTGCTTA
CTCACCCTACTCCCTTAGACAATGCAATGCTGTGAACACGAAAGTTTGCAGTTCAGCCCTCTTCTCCCATGCAGAGTCGCAGGCAGCGCCT