Detailed information on CNT30101620


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693788Oryza rufipogonOryza sativa40.5469.92100165forward
CNT30392062Oryza rufipogonTriticum turgidum21.1327.5689.5386forward
CNT30116803Oryza rufipogonOryza nivara72.4860.799.66295forward

Expression of CNT30101620

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MCFWTSSLNSDQSREACPCVQNPEITQDKFT*

Sequence

>CNT30101620
GTCTCAACTTGGATTACAGCGAGATTAACGTGCGCTCCTCCCTAACACCTCTACGTCACATCCCGTAGTTAACCGGACAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGTACATCTATTATTCAGATATTATTCCAATGTGTTTCTGGACAAGTAGCCTAAACTCCGATCAGTCTCGAGAAGCCTGCCCGTGTGTGC
AAAATCCAGAAATCACCCAGGACAAATTTACATGATCCCAACCGTATTTGAGGCCATTAACATTGATTAAAGTCAAACTATGGCCGTTCCGACTCCGAAG
GCGCTATCATAGTTCCTCACCATGTTCTTCGTCGAGGGCATACCAGCAACAACATCTTCTTCGATGCCACATTCGTTTGTGCCCCTTATGATCTTGAAGT
ACCCATC