Detailed information on CNT30116803


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693788Oryza nivaraOryza sativa48.5610099.15236forward
CNT30392062Oryza nivaraTriticum turgidum17.727.5689.5386forward
CNT30101620Oryza nivaraOryza rufipogon60.772.4899.66295forward

Expression of CNT30116803

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MCFWTSSLNSDQCREACPCVQNPEITQDKFT*

Sequence

>CNT30116803
TGATTGAACAAAATCCATACTTTTGGGATACTAGTAAGCAGCGCACAGATCGCATATCATTTGACTTACAGCATACACATTAATTCTTCAAGTCTCAACT
TGGATTACAGCGAGATTAACGTGCGCTCCTCCCTAACACCTCTACGTCACATCCCGTAGTTAACCGGACAGAGAGAGAGAGAGAGAGAGAGTACATCTAT
TATTCAGATATTATTCCAATGTGTTTCTGGACAAGTAGCCTAAACTCCGATCAGTGTCGAGAAGCCTGCCCGTGTGTGCAAAATCCAGAAATCACCCAGG
ACAAATTTACATGATCCCAACCGTATTTGAGGCCATTAACATTGATTAAAGTCAAACTATGGCCGTTCCGACTCCGAAGGCGCTATCATAGTTCCTCACC
ATGTTCTTCGTCGAGGGCATACCAGCAACAACATCTTCTTCGATGCCACATTCGTTTGTGCCCCTTATGATCTTGAAGTACCCATC