SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 6964 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3054944 Amborella trichopoda AmTr_v1.0_scaffold00041:3490127-3491934 (-) coding (0.066)0.000005 (sp|Q9XIB6|PLRX2_ARATH) 87 0.92 3
CNT3054942 Amborella trichopoda AmTr_v1.0_scaffold00041:1154834-1156696 (-) noncoding (-0.0503808)- 66 85.99 2
CNT3054941 Amborella trichopoda AmTr_v1.0_scaffold00041:5365692-5367592 (+) noncoding (-0.0794624)0.000001 (sp|P10978|POLX_TOBAC) 81 2.66 1
CNT3054940 Amborella trichopoda AmTr_v1.0_scaffold00041:582360-583001 (-) noncoding (-0.0126976)5e-66 (sp|P46299|RS4_GOSHI) 60 284.75 2
CNT3054939 Amborella trichopoda AmTr_v1.0_scaffold00041:3311872-3315227 (-) noncoding (-0.012288)- 52 26.14 2
CNT3054938 Amborella trichopoda AmTr_v1.0_scaffold00041:3490232-3491894 (-) coding (0.045)- 87 0 5
CNT3054937 Amborella trichopoda AmTr_v1.0_scaffold00041:3311748-3315227 (-) noncoding (-0.045056)- 56 6.59 2
CNT3054936 Amborella trichopoda AmTr_v1.0_scaffold00041:565806-566077 (+) noncoding (-0.0004096)- - 11.64 1
CNT3054934 Amborella trichopoda AmTr_v1.0_scaffold00041:1406924-1407312 (+) noncoding (-0.0004096)- 69 0.81 2
CNT3054933 Amborella trichopoda AmTr_v1.0_scaffold00041:3333731-3334224 (+) noncoding (-0.008192)- 35 29.95 2
CNT3054932 Amborella trichopoda AmTr_v1.0_scaffold00041:3490232-3491894 (-) coding (0.041)- 87 0.14 5
CNT3054931 Amborella trichopoda AmTr_v1.0_scaffold00041:1928165-1929427 (+) noncoding (-0.016384)- 61 3.76 1
CNT3054929 Amborella trichopoda AmTr_v1.0_scaffold00041:3490369-3491881 (-) coding (0.048)- 90 2.47 4
CNT3054928 Amborella trichopoda AmTr_v1.0_scaffold00041:202329-202920 (-) noncoding (-0.0004096)- 90 38.31 1
CNT3054927 Amborella trichopoda AmTr_v1.0_scaffold00041:3490127-3491934 (-) coding (0.077)- 87 6.64 2
CNT3054926 Amborella trichopoda AmTr_v1.0_scaffold00041:1525898-1532965 (+) noncoding (-0.008192)- 70 14.82 4
CNT3054925 Amborella trichopoda AmTr_v1.0_scaffold00041:3490127-3491934 (-) coding (0.059)0.000008 (sp|Q3E8Z8|PME28_ARATH) 87 0.28 4
CNT3054924 Amborella trichopoda AmTr_v1.0_scaffold00041:3079604-3081386 (+) noncoding (-0.098304)- - 8.28 2
CNT3054923 Amborella trichopoda AmTr_v1.0_scaffold00041:3308853-3311007 (+) noncoding (-0.110592)- 68 2.87 2
CNT3054922 Amborella trichopoda AmTr_v1.0_scaffold00041:3311737-3315233 (+) coding (0.03)- 78 20.22 2
CNT3054921 Amborella trichopoda AmTr_v1.0_scaffold00041:2046286-2046636 (-) noncoding (-0.0004096)2e-50 (sp|Q95747|RM16_ARATH) - 710.08 1
CNT3054919 Amborella trichopoda AmTr_v1.0_scaffold00041:1388176-1388895 (-) noncoding (-0.1024)- - 5.8 2
CNT3054918 Amborella trichopoda AmTr_v1.0_scaffold00041:3490222-3491820 (-) coding (0.06)- 80 2.59 3
CNT3054917 Amborella trichopoda AmTr_v1.0_scaffold00041:614767-619293 (-) noncoding (-0.073728)- 91 5.15 2
CNT3054916 Amborella trichopoda AmTr_v1.0_scaffold00041:1336220-1351889 (-) noncoding (-0.14336)- 59 5.69 3
CNT3054915 Amborella trichopoda AmTr_v1.0_scaffold00041:1780608-1780976 (+) noncoding (-0.024576)- 63 7.46 1
CNT3054914 Amborella trichopoda AmTr_v1.0_scaffold00041:3308819-3310975 (+) noncoding (-0.110592)- 68 1.03 2
CNT3054913 Amborella trichopoda AmTr_v1.0_scaffold00041:3490232-3491894 (-) coding (0.058)- 87 3.55 5
CNT3054911 Amborella trichopoda AmTr_v1.0_scaffold00041:1794339-1795085 (+) noncoding (-0.610304)- 74 3.95 1
CNT3054910 Amborella trichopoda AmTr_v1.0_scaffold00041:4660725-4661079 (-) noncoding (-0.0004096)- 50 5.32 2
CNT3054908 Amborella trichopoda AmTr_v1.0_scaffold00041:126226-137620 (-) noncoding (-0.139264)- 98 7.29 2
CNT3054907 Amborella trichopoda AmTr_v1.0_scaffold00041:3490369-3491881 (-) coding (0.056)- 90 361.47 3
CNT3054906 Amborella trichopoda AmTr_v1.0_scaffold00041:1599289-1611569 (-) noncoding (-0.0659456)2e-62 (sp|O82485|OPT7_ARATH) 82 4.28 2
CNT3054905 Amborella trichopoda AmTr_v1.0_scaffold00041:3490127-3491934 (-) coding (0.058)- 87 0.3 3
CNT3054904 Amborella trichopoda AmTr_v1.0_scaffold00041:3490127-3491934 (-) coding (0.076)0.0000004 (sp|Q9XIB6|PLRX2_ARATH) 87 20.28 2
CNT3054903 Amborella trichopoda AmTr_v1.0_scaffold00041:3490369-3491881 (-) coding (0.062)- 90 360.42 3
CNT3054902 Amborella trichopoda AmTr_v1.0_scaffold00041:666758-667060 (+) noncoding (-0.0335872)- 78 2.04 2
CNT3054901 Amborella trichopoda AmTr_v1.0_scaffold00041:2431851-2432871 (+) noncoding (-0.0413696)- 30 7.74 2
CNT3054900 Amborella trichopoda AmTr_v1.0_scaffold00041:1332710-1334586 (+) noncoding (-0.0229376)- 81 6.8 1
CNT3054899 Amborella trichopoda AmTr_v1.0_scaffold00041:1336276-1351868 (-) noncoding (-0.016384)- 85 2.53 3
CNT3054898 Amborella trichopoda AmTr_v1.0_scaffold00041:2519397-2527677 (-) coding (0.077)- 99 0.25 2
CNT3054897 Amborella trichopoda AmTr_v1.0_scaffold00041:3308854-3310981 (+) noncoding (-0.110592)- 68 2.35 2
CNT3054896 Amborella trichopoda AmTr_v1.0_scaffold00041:2963910-2965236 (-) noncoding (-0.004096)- 69 2.59 2
CNT3054894 Amborella trichopoda AmTr_v1.0_scaffold00041:2072153-2072883 (+) noncoding (-0.0004096)- 71 69.26 1
CNT3054893 Amborella trichopoda AmTr_v1.0_scaffold00041:1302681-1302977 (+) coding (0.228)- 50 15.03 1
CNT3054892 Amborella trichopoda AmTr_v1.0_scaffold00041:1505320-1507562 (+) noncoding (-0.118784)- 71 19.9 3
CNT3054890 Amborella trichopoda AmTr_v1.0_scaffold00041:1086007-1086286 (-) noncoding (-0.0004096)- - 0.61 1
CNT3054889 Amborella trichopoda AmTr_v1.0_scaffold00041:1785195-1786109 (+) noncoding (-0.0274432)- 85 9.37 3
CNT3054888 Amborella trichopoda AmTr_v1.0_scaffold00041:3968558-3968836 (-) noncoding (-0.0004096)- 51 20.19 1
CNT3054887 Amborella trichopoda AmTr_v1.0_scaffold00039:4574319-4575092 (+) noncoding (-0.106496)- 65 83.57 1