SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 8440 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3095859 Solanum tuberosum 8:48171262-48171635 (-) noncoding (-0.02048)2e-17 (sp|Q9FHJ6|RFA1C_ARATH) 70 10.58 2
CNT3095857 Solanum tuberosum 8:39899925-39901228 (+) noncoding (-0.0516096)- 58 21.69 2
CNT3095856 Solanum tuberosum 8:1483161-1558872 (+) noncoding (-0.024576)- 61 97.55 2
CNT3095855 Solanum tuberosum 8:18127384-18129125 (-) noncoding (-0.069632)- 65 5.83 5
CNT3095853 Solanum tuberosum 8:45352309-45352612 (+) noncoding (-0.0004096)- 54 26.39 1
CNT3095851 Solanum tuberosum 8:49801098-49804142 (+) noncoding (-0.0004096)- 50 22.89 2
CNT3095850 Solanum tuberosum 8:10109739-10110213 (+) noncoding (-0.0004096)- 39 0 2
CNT3095849 Solanum tuberosum 8:53513308-53521617 (+) noncoding (-0.04096)- 75 6.18 3
CNT3095848 Solanum tuberosum 8:52433424-52434788 (-) noncoding (-0.303104)- 67 8.52 3
CNT3095847 Solanum tuberosum 8:261059-269360 (+) noncoding (-0.148685)6e-67 (sp|A0A0M3R8G2|SBT_PETHY) 65 19.26 2
CNT3095846 Solanum tuberosum 8:10109716-10110218 (+) noncoding (-0.118784)- 64 37.47 2
CNT3095845 Solanum tuberosum 8:52441866-52446729 (-) noncoding (-0.086016)- 58 6.31 2
CNT3095844 Solanum tuberosum 8:26210074-26219107 (-) noncoding (-0.1024)- 35 5.22 2
CNT3095843 Solanum tuberosum 8:42958627-42967574 (+) noncoding (-0.0126976)5e-58 (sp|Q942D4|BURP3_ORYSJ) 71 13.95 2
CNT3095842 Solanum tuberosum 8:8230550-8230811 (-) noncoding (-0.0004096)- - 57.47 1
CNT3095841 Solanum tuberosum 8:38921632-38923724 (+) noncoding (-0.0004096)- 55 5.61 2
CNT3095840 Solanum tuberosum 8:43575089-43599842 (-) noncoding (-0.02048)- 69 1245.99 2
CNT3095839 Solanum tuberosum 8:48519452-48582546 (+) noncoding (-0.0004096)1e-40 (sp|Q7XBQ9|RGA2_SOLBU) 51 3.28 3
CNT3095838 Solanum tuberosum 8:678860-683451 (+) noncoding (-0.0004096)- - 2.2 2
CNT3095837 Solanum tuberosum 8:41436343-41436657 (-) noncoding (-0.0622592)- 89 6.44 1
CNT3095835 Solanum tuberosum 8:46499170-46503872 (+) noncoding (-0.028672)- 40 2.06 4
CNT3095834 Solanum tuberosum 8:39856459-39864047 (+) noncoding (-0.0053248)- 40 153.23 2
CNT3095833 Solanum tuberosum 8:55951748-55959480 (+) coding (0.018)- 77 5.82 4
CNT3095832 Solanum tuberosum 8:52873612-52877566 (-) noncoding (-0.0004096)2e-40 (sp|P37120|C75A2_SOLME) 42 3.26 2
CNT3095829 Solanum tuberosum 8:12513889-12527483 (+) noncoding (-0.04096)- 64 0.75 3
CNT3095828 Solanum tuberosum 8:52434945-52441039 (-) noncoding (-0.0114688)- 37 9.19 2
CNT3095827 Solanum tuberosum 8:45783465-45785299 (+) noncoding (-0.0004096)- - 40.11 2
CNT3095826 Solanum tuberosum 8:51565055-51581043 (-) noncoding (-0.073728)- 72 0.72 3
CNT3095825 Solanum tuberosum 8:28383316-28393080 (+) coding (0.064)- 82 3.22 2Conserved counterparts:
CNT3095824 Solanum tuberosum 8:48972152-48978163 (+) noncoding (-0.0004096)- 63 3.37 6
CNT3095823 Solanum tuberosum 8:47019877-47025575 (-) noncoding (-0.0004096)- 38 39.02 2
CNT3095822 Solanum tuberosum 8:53687064-53698736 (-) noncoding (-0.0253952)2e-31 (sp|Q9LUM3|SBT15_ARATH) 86 3.12 2
CNT3095821 Solanum tuberosum 8:54540176-54546796 (-) noncoding (-0.0004096)- 29 1.95 2
CNT3095820 Solanum tuberosum 8:16755792-16760454 (+) noncoding (-0.0274432)- 74 0.19 6Conserved counterparts:
CNT3095819 Solanum tuberosum 8:51443746-51444913 (-) noncoding (-0.0004096)- - 16.7 2
CNT3095818 Solanum tuberosum 8:42110221-42112489 (+) coding (0.068)- 76 4.45 1
CNT3095817 Solanum tuberosum 8:6415650-6418194 (-) noncoding (-0.0294912)- 94 5.61 2
CNT3095816 Solanum tuberosum 8:49975430-49977527 (-) coding (0.191)0 (sp|Q9LQL2|PTR14_ARATH) 53 2.33 2
CNT3095815 Solanum tuberosum 8:53001497-53012102 (+) noncoding (-0.156058)5e-90 (sp|Q8H1H9|CAOG1_ARATH) 51 60.73 2
CNT3095814 Solanum tuberosum 8:16876860-16879505 (+) noncoding (-0.0004096)- 45 19.64 2
CNT3095813 Solanum tuberosum 8:1472854-1649975 (+) noncoding (-0.0004096)- 36 24.71 3
CNT3095812 Solanum tuberosum 8:54195070-54195987 (+) noncoding (-0.0004096)- 65 8.73 2
CNT3095811 Solanum tuberosum 8:18607336-18609495 (-) noncoding (-0.0004096)- 43 10.78 2
CNT3095810 Solanum tuberosum 8:44112223-44178009 (+) noncoding (-0.0004096)3e-42 (sp|Q9SMB8|THT11_TOBAC) 43 48.66 2
CNT3095809 Solanum tuberosum 8:11942621-11956280 (-) noncoding (-0.229376)- - 216.74 2
CNT3095807 Solanum tuberosum 8:33298922-33299347 (-) noncoding (-0.0004096)- 37 14.88 2
CNT3095806 Solanum tuberosum 8:28455602-28459098 (+) noncoding (-0.049152)0.0000002 (sp|Q94HW2|POLR1_ARATH) 40 18.14 2
CNT3095805 Solanum tuberosum 8:46025631-46032947 (-) noncoding (-0.0004096)2e-19 (sp|Q9FZ70|FDL1_ARATH) 52 3.85 2
CNT3095804 Solanum tuberosum 8:12513919-12526136 (+) noncoding (-0.04096)- 49 0.27 2
CNT3095803 Solanum tuberosum 8:53632430-53657931 (-) noncoding (-0.0622592)- 97 0.39 3