SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3556 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT3060257 Arabidopsis lyrata 3:22833227-22836682 (+) noncoding (-0.105267)- 47 21.56 4
CNT3060256 Arabidopsis lyrata 3:9925760-9927443 (+) noncoding (-0.0012288)- 57 31.74 4
CNT3060255 Arabidopsis lyrata 3:6648996-6649257 (-) noncoding (-0.0004096)- 66 10.5 1Expressed preferentially in leaf
CNT3060254 Arabidopsis lyrata 3:13453514-13455764 (+) noncoding (-0.0004096)- 31 43.27 2
CNT3060253 Arabidopsis lyrata 3:4157430-4158590 (-) coding (0.032)- 86 10.19 4
CNT3060252 Arabidopsis lyrata 3:1214246-1214915 (-) noncoding (-0.352256)- 46 21.6 2
CNT3060251 Arabidopsis lyrata 3:15252394-15276768 (+) noncoding (-0.0004096)- - 15.91 3
CNT3060250 Arabidopsis lyrata 3:6270253-6271153 (-) noncoding (-0.024576)- 47 10.29 3
CNT3060249 Arabidopsis lyrata 3:22681664-22681963 (+) noncoding (-0.0004096)- 52 18.83 1
CNT3060248 Arabidopsis lyrata 3:8069724-8070949 (-) noncoding (-0.0135168)3e-95 (sp|Q9LS99|ATL77_ARATH) 59 4.02 4
CNT3060247 Arabidopsis lyrata 3:23255226-23256304 (-) noncoding (-0.1024)- 47 10.36 2
CNT3060246 Arabidopsis lyrata 3:22833284-22836145 (+) noncoding (-0.20521)- 54 15.52 4
CNT3060245 Arabidopsis lyrata 3:5891590-5893781 (+) noncoding (-0.0004096)- 55 11.48 2
CNT3060244 Arabidopsis lyrata 3:17449724-17450656 (+) coding (0.258)4e-25 (sp|Q9SU35|ERLL1_ARATH) 60 0.63 2
CNT3060242 Arabidopsis lyrata 3:8479530-8480320 (+) noncoding (-0.0004096)- 52 4.73 1
CNT3060241 Arabidopsis lyrata 3:8147076-8148432 (-) noncoding (-0.270336)- 66 5.31 3Expressed preferentially in leaf
CNT3060240 Arabidopsis lyrata 3:24126272-24126889 (+) noncoding (-0.0004096)- - 11.71 1
CNT3060239 Arabidopsis lyrata 3:4903059-4904576 (+) noncoding (-0.004096)- 72 21.72 5
CNT3060238 Arabidopsis lyrata 3:11243052-11243556 (+) noncoding (-0.0004096)- 42 85.59 1Expressed preferentially in leaf
CNT3060237 Arabidopsis lyrata 3:15252446-15335774 (+) noncoding (-0.155648)- - 16.03 2
CNT3060236 Arabidopsis lyrata 3:15278189-15321183 (-) noncoding (-0.0004096)- - 3.51 4
CNT3060235 Arabidopsis lyrata 3:24303508-24306787 (-) noncoding (-0.053248)- 80 8.21 6
CNT3060234 Arabidopsis lyrata 3:13709906-13711617 (-) noncoding (-0.053248)- - 11.79 2
CNT3060233 Arabidopsis lyrata 3:13777924-13778365 (-) noncoding (-0.0004096)- - 29.31 1
CNT3060232 Arabidopsis lyrata 3:10978495-10980674 (+) noncoding (-0.0004096)- 44 14.15 3
CNT3060231 Arabidopsis lyrata 3:11129910-11131057 (+) noncoding (-0.032768)- - 12.11 2
CNT3060230 Arabidopsis lyrata 3:1214246-1214929 (-) noncoding (-0.352256)- 51 12.63 1
CNT3060229 Arabidopsis lyrata 3:19395802-19397116 (-) noncoding (-0.049152)- 59 29.04 4
CNT3060228 Arabidopsis lyrata 3:6951071-6952050 (+) noncoding (-0.454656)2e-68 (sp|O04309|JAL35_ARATH) 48 87.85 2
CNT3060227 Arabidopsis lyrata 3:6123019-6123911 (-) noncoding (-0.0004096)- - 248.79 2
CNT3060226 Arabidopsis lyrata 3:1523775-1524212 (+) noncoding (-0.0004096)0.000000001 (sp|Q2V365|DEF48_ARATH) 77 43.86 2
CNT3060225 Arabidopsis lyrata 3:7525552-7527211 (-) coding (0.088)5e-70 (sp|Q9LUN2|YSL5_ARATH) 90 4.64 5
CNT3060224 Arabidopsis lyrata 3:13163680-13164724 (-) noncoding (-0.139264)- 71 5.14 2
CNT3060223 Arabidopsis lyrata 3:15252394-15276439 (+) noncoding (-0.0004096)- - 1.49 2
CNT3060222 Arabidopsis lyrata 3:2306129-2306940 (+) noncoding (-0.028672)- 86 15.52 2
CNT3060221 Arabidopsis lyrata 3:13089784-13090652 (+) noncoding (-0.098304)- 37 2.85 2
CNT3060219 Arabidopsis lyrata 3:5453047-5453756 (+) coding (0.01)- 92 22.32 2
CNT3060218 Arabidopsis lyrata 3:2119522-2120723 (+) noncoding (-0.032768)- 53 1841.16 2Expressed preferentially in leaf
CNT3060217 Arabidopsis lyrata 3:4219416-4220963 (+) noncoding (-0.0004096)- 64 58.44 2
CNT3060216 Arabidopsis lyrata 3:23389852-23390855 (-) noncoding (-0.0004096)- - 5.29 1
CNT3060215 Arabidopsis lyrata 3:908530-911630 (-) noncoding (-0.14336)- 76 0 4
CNT3060214 Arabidopsis lyrata 3:22833295-22836138 (+) noncoding (-0.0004096)- 50 8.39 5
CNT3060213 Arabidopsis lyrata 3:14931993-14932205 (-) noncoding (-0.111821)- 70 0 1
CNT3060212 Arabidopsis lyrata 3:2441857-2442158 (+) noncoding (-0.0495616)- 56 3.32 2
CNT3060211 Arabidopsis lyrata 3:17934420-17936488 (+) noncoding (-0.049152)- 56 0.56 6
CNT3060210 Arabidopsis lyrata 3:13709695-13711630 (-) noncoding (-0.0004096)- 35 19.25 3
CNT3060208 Arabidopsis lyrata 3:3378223-3379358 (+) coding (0.023)5e-81 (sp|Q0WLB5|CLAH2_ARATH) 31 16.58 2
CNT3060207 Arabidopsis lyrata 3:7344729-7345748 (+) noncoding (-0.0004096)3e-34 (sp|Q9LUV1|PMEI2_ARATH) - 13.26 2
CNT3060206 Arabidopsis lyrata 3:2219599-2220100 (-) noncoding (-0.045056)- 73 0 1
CNT3060204 Arabidopsis lyrata 3:9849572-9850697 (+) noncoding (-0.0004096)0.0000000000008 (sp|C0LGR6|Y4291_ARATH) 56 12.45 3