SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3407 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30509507 Solanum lycopersicum 4:12103371-12147317 (+) noncoding (-0.057344)- 80 6.24 2
CNT30509505 Solanum lycopersicum 4:32201701-32202243 (-) noncoding (-0.086016)- 78 0 1
CNT30509504 Solanum lycopersicum 4:60894001-60894339 (-) noncoding (-0.0004096)- 50 8.1 2
CNT30509503 Solanum lycopersicum 4:5461631-5463705 (+) coding (0.088)- 100 3.9 2Conserved counterparts:
CNT30509502 Solanum lycopersicum 4:47495695-47497529 (-) noncoding (-0.0004096)- 48 19.47 2Conserved counterparts:
CNT30509501 Solanum lycopersicum 4:65104631-65105041 (-) noncoding (-0.0004096)2e-26 (sp|Q9SUL1|RD19C_ARATH) 53 234.62 2Conserved counterparts:
CNT30509500 Solanum lycopersicum 4:9493522-9494719 (-) noncoding (-0.045056)- 47 10.13 2
CNT30509498 Solanum lycopersicum 4:34229091-34232967 (-) noncoding (-0.167936)- 57 7.26 3
CNT30509497 Solanum lycopersicum 4:48937539-48938190 (+) noncoding (-0.0647168)- 84 5.17 2
CNT30509496 Solanum lycopersicum 4:36395787-36434169 (+) noncoding (-0.0004096)- 36 9.38 2
CNT30509495 Solanum lycopersicum 4:45437812-45441985 (+) noncoding (-0.0004096)- 75 5.8 1
CNT30509494 Solanum lycopersicum 4:55055693-55056589 (-) noncoding (-0.0004096)- 52 10.81 2
CNT30509493 Solanum lycopersicum 4:6109097-6112188 (+) noncoding (-0.0094208)- 98 27.22 1
CNT30509492 Solanum lycopersicum 4:6155746-6193292 (-) noncoding (-0.049152)7e-42 (sp|P31843|RRPO_OENBE) 78 1.48 2
CNT30509491 Solanum lycopersicum 4:18796561-18805158 (-) noncoding (-0.12288)- 81 4.51 3
CNT30509490 Solanum lycopersicum 4:2242192-2243216 (+) noncoding (-0.073728)2e-17 (sp|Q8RUS5|ATG9_ARATH) 57 9.38 2
CNT30509489 Solanum lycopersicum 4:42066741-42068084 (+) noncoding (-0.0004096)- 56 3.55 2
CNT30509488 Solanum lycopersicum 4:64048472-64051974 (-) noncoding (-0.0004096)- - 0.22 2Conserved counterparts:
CNT30509487 Solanum lycopersicum 4:58519342-58520166 (-) noncoding (-0.0004096)- 37 258.17 2Conserved counterparts:
CNT30509486 Solanum lycopersicum 4:26986279-26989640 (+) noncoding (-0.073728)- 44 6.97 2
CNT30509485 Solanum lycopersicum 4:60866651-60867244 (-) noncoding (-0.0004096)- 90 18.77 2
CNT30509484 Solanum lycopersicum 4:27272615-27273408 (-) noncoding (-0.0004096)- 73 9.7 2Conserved counterparts:
CNT30509483 Solanum lycopersicum 4:66449573-66450440 (+) noncoding (-0.053248)- 40 15.66 1
CNT30509481 Solanum lycopersicum 4:42474636-42479165 (-) noncoding (-0.0004096)- 77 7.56 2
CNT30509479 Solanum lycopersicum 4:24369770-24371089 (+) noncoding (-0.02048)- 48 19.91 2
CNT30509478 Solanum lycopersicum 4:36935768-36939206 (-) noncoding (-0.0004096)- 34 4.39 2
CNT30509477 Solanum lycopersicum 4:16623146-16625927 (+) noncoding (-0.0004096)- 52 7.32 2
CNT30509476 Solanum lycopersicum 4:9078769-9084963 (-) noncoding (-0.0004096)- 31 88.7 2
CNT30509475 Solanum lycopersicum 4:28506150-28521562 (+) noncoding (-0.0004096)- 58 13.8 3
CNT30509473 Solanum lycopersicum 4:60593621-60593898 (-) noncoding (-0.0004096)- 44 22.71 1
CNT30509472 Solanum lycopersicum 4:12740979-12741353 (-) noncoding (-0.0004096)- 99 1.09 2
CNT30509471 Solanum lycopersicum 4:30308147-30309489 (-) noncoding (-0.1024)- 64 15.89 2
CNT30509470 Solanum lycopersicum 4:4429175-4429915 (+) noncoding (-0.0786432)1e-24 (sp|Q43643|14332_SOLTU) 32 4.61 2
CNT30509469 Solanum lycopersicum 4:55369979-55371376 (-) noncoding (-0.012288)- 52 12.74 1
CNT30509467 Solanum lycopersicum 4:31713211-31715536 (-) noncoding (-0.02048)- 52 12.41 2
CNT30509466 Solanum lycopersicum 4:64930772-64931299 (+) noncoding (-0.0004096)- 43 312.27 1Conserved counterparts:
CNT30509465 Solanum lycopersicum 4:35193029-35195483 (-) noncoding (-0.057344)- 58 15.14 2
CNT30509464 Solanum lycopersicum 4:47449172-47464099 (+) noncoding (-0.0032768)- 72 6.15 3Conserved counterparts:
CNT30509463 Solanum lycopersicum 4:9637273-9638818 (-) noncoding (-0.0413696)- 83 10.47 1
CNT30509462 Solanum lycopersicum 4:47495695-47497529 (-) noncoding (-0.0004096)- 48 9.66 2Conserved counterparts:
CNT30509461 Solanum lycopersicum 4:3316429-3333944 (-) noncoding (-0.0421888)- 61 9.9 2
CNT30509460 Solanum lycopersicum 4:32027401-32029699 (+) noncoding (-0.004096)- 63 9.6 2
CNT30509459 Solanum lycopersicum 4:60922967-60929345 (-) noncoding (-0.0004096)- 57 17.91 2
CNT30509458 Solanum lycopersicum 4:3580765-3582038 (-) noncoding (-0.0421888)3e-22 (sp|Q9C942|CSE_ARATH) 62 15.26 2
CNT30509457 Solanum lycopersicum 4:58904432-58905205 (-) noncoding (-0.0004096)- 34 3.51 3
CNT30509456 Solanum lycopersicum 4:6109097-6112188 (-) coding (0.116)- 76 7.09 1
CNT30509455 Solanum lycopersicum 4:9970552-9973271 (+) noncoding (-0.016384)- 90 6.11 1
CNT30509454 Solanum lycopersicum 4:60932054-60937593 (+) noncoding (-0.0004096)- 39 13.15 4
CNT30509453 Solanum lycopersicum 4:65961091-65962315 (+) noncoding (-0.0004096)- 94 17.29 1
CNT30509452 Solanum lycopersicum 4:21686676-21687591 (+) noncoding (-0.0004096)- 55 7.74 2