SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 6661 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30264514 Brassica rapa A09:22514939-22516541 (-) coding (0.074)- 54 7.97 5Conserved counterparts:
CNT30264513 Brassica rapa A09:555874-556598 (-) noncoding (-0.121242)- 100 2.5 2
CNT30264512 Brassica rapa A09:23218377-23219826 (-) noncoding (-0.188416)- 58 45.59 3
CNT30264511 Brassica rapa A09:12080995-12081656 (-) noncoding (-0.0311296)- 95 1.51 1
CNT30264510 Brassica rapa A09:20380911-20382524 (+) coding (0.099)- 48 8.69 4
CNT30264509 Brassica rapa A09:16019713-16024232 (+) noncoding (-0.0282624)- 70 3.56 8
CNT30264508 Brassica rapa A09:2768730-2770925 (+) noncoding (-0.0004096)- - 1.71 2
CNT30264507 Brassica rapa A09:604946-611547 (-) noncoding (-0.0004096)- 30 0 3
CNT30264506 Brassica rapa A09:23295575-23297352 (-) noncoding (-0.0045056)- 52 0.82 6
CNT30264505 Brassica rapa A09:17899891-17900935 (-) noncoding (-0.0004096)- 62 118.41 1
CNT30264504 Brassica rapa A09:8742885-8746800 (-) coding (0.127)0 (sp|Q9ZT94|POLR2_ARATH) 82 54.74 1Conserved counterparts:
CNT30264503 Brassica rapa A09:5470540-5473272 (-) noncoding (-0.07168)- 38 15.43 5
CNT30264502 Brassica rapa A09:18579836-18580533 (-) noncoding (-0.065536)- 34 22.89 2Conserved counterparts:
CNT30264501 Brassica rapa A09:14623649-14624344 (-) noncoding (-0.0004096)- 46 2.48 1
CNT30264500 Brassica rapa A09:858551-858904 (-) noncoding (-0.0004096)- 53 2.63 1
CNT30264499 Brassica rapa A09:9090871-9091386 (-) noncoding (-0.0004096)2e-32 (sp|Q9XIF2|MTR4_ARATH) 45 4.5 2
CNT30264498 Brassica rapa A09:1858311-1859536 (+) noncoding (-0.008192)- 87 9.38 2
CNT30264497 Brassica rapa A09:31651959-31654652 (-) noncoding (-0.0004096)- 43 0 2
CNT30264496 Brassica rapa A09:19722985-19723736 (+) noncoding (-0.057344)1e-28 (sp|Q9SG80|ASD1_ARATH) 67 5.95 1
CNT30264494 Brassica rapa A09:12091824-12092596 (-) noncoding (-0.0774144)- 74 0.63 3Conserved counterparts:
CNT30264493 Brassica rapa A09:29884954-29885683 (+) noncoding (-0.0196608)2e-51 (sp|Q941L2|BAP1_ARATH) 39 54.01 3
CNT30264492 Brassica rapa A09:24787572-24788452 (+) noncoding (-0.0004096)- - 4.78 2
CNT30264491 Brassica rapa A09:4010784-4012651 (-) noncoding (-0.049152)- 52 6.1 1
CNT30264489 Brassica rapa A09:226847-229385 (-) noncoding (-0.0004096)- 43 0 3
CNT30264488 Brassica rapa A09:20673303-20675579 (+) noncoding (-0.0004096)- 61 2.06 1
CNT30264487 Brassica rapa A09:34780883-34782685 (-) noncoding (-0.0004096)- 64 28.82 2
CNT30264486 Brassica rapa A09:8084544-8086677 (+) coding (0.079)- 80 5.57 3
CNT30264485 Brassica rapa A09:10834833-10835274 (-) noncoding (-0.0221184)2e-36 (sp|Q9ZPE4|FBW2_ARATH) 72 5.28 2
CNT30264484 Brassica rapa A09:20977167-20978594 (-) noncoding (-0.0512)- 51 201.61 2
CNT30264483 Brassica rapa A09:21902872-21904072 (+) noncoding (-0.002048)- 71 5.61 2
CNT30264481 Brassica rapa A09:18848433-18858068 (+) noncoding (-0.0004096)- 64 1.89 2
CNT30264480 Brassica rapa A09:14460445-14464059 (-) coding (0.098)- 86 4.61 2
CNT30264479 Brassica rapa A09:18446051-18449091 (+) noncoding (-0.118784)- 66 13.9 2
CNT30264478 Brassica rapa A09:25345899-25350101 (+) coding (0.05)0 (sp|P10978|POLX_TOBAC) 83 2.94 3Conserved counterparts:
CNT30264477 Brassica rapa A09:23013723-23014131 (-) noncoding (-0.0004096)- - 2.1 1
CNT30264476 Brassica rapa A09:20235168-20237606 (+) noncoding (-0.06144)- 46 68.56 2
CNT30264475 Brassica rapa A09:12091824-12092459 (-) noncoding (-0.0684032)- 74 73.17 2Conserved counterparts:
CNT30264473 Brassica rapa A09:5379542-5380468 (-) noncoding (-0.0004096)- 43 29.37 2
CNT30264472 Brassica rapa A09:31419108-31419376 (-) noncoding (-0.0004096)- - 12.95 2
CNT30264471 Brassica rapa A09:13308967-13309501 (+) noncoding (-0.0004096)- 80 3.18 1
CNT30264470 Brassica rapa A09:36700243-36702246 (-) noncoding (-0.0147456)- 55 0.65 4
CNT30264469 Brassica rapa A09:19823892-19826355 (+) noncoding (-0.026624)- 67 3.7 5Conserved counterparts:
CNT30264467 Brassica rapa A09:32463469-32463818 (+) noncoding (-0.0004096)- 41 0.32 2
CNT30264466 Brassica rapa A09:11641281-11642689 (+) noncoding (-0.0172032)- 63 18.49 2Conserved counterparts:
CNT30264465 Brassica rapa A09:29648595-29650493 (-) noncoding (-0.0335872)- 89 31.87 1Conserved counterparts:
CNT30264464 Brassica rapa A09:9719898-9721472 (-) noncoding (-0.4096)- 85 2.96 2
CNT30264463 Brassica rapa A09:21744366-21746480 (+) noncoding (-0.0004096)- 36 12.5 2
CNT30264462 Brassica rapa A09:331234-336441 (+) noncoding (-0.0004096)- 33 5.38 2Conserved counterparts:
CNT30264461 Brassica rapa A09:22916814-22920258 (+) noncoding (-0.0004096)- - 33.05 2
CNT30264460 Brassica rapa A09:9476682-9477606 (-) noncoding (-0.0004096)- 60 1.97 1