SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3407 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30511902 Solanum lycopersicum 12:59330432-59364961 (-) noncoding (-0.0004096)- 39 7.06 2
CNT30511900 Solanum lycopersicum 12:25738087-25763678 (-) noncoding (-0.008192)- 70 2.99 3
CNT30511899 Solanum lycopersicum 12:25391765-25401867 (-) noncoding (-0.006144)- 54 5.31 2
CNT30511898 Solanum lycopersicum 12:61889882-61891231 (-) noncoding (-0.049152)- 79 10.74 2
CNT30511897 Solanum lycopersicum 12:56411566-56412405 (+) noncoding (-0.07168)1e-23 (sp|Q94HW2|POLR1_ARATH) 61 15.09 1
CNT30511896 Solanum lycopersicum 12:2922825-2923602 (+) noncoding (-0.0217088)1e-16 (sp|P14009|14KD_DAUCA) 33 4.1 3
CNT30511895 Solanum lycopersicum 12:24997007-25004570 (+) noncoding (-0.0004096)- - 7.79 3
CNT30511894 Solanum lycopersicum 12:58296994-58299568 (-) noncoding (-0.0004096)- 35 9.92 2
CNT30511893 Solanum lycopersicum 12:32276886-32279488 (-) noncoding (-0.065536)- 35 95.46 2
CNT30511891 Solanum lycopersicum 12:13889819-13893594 (+) noncoding (-0.106496)- - 13.97 3
CNT30511890 Solanum lycopersicum 12:43662950-43679182 (+) noncoding (-0.02048)- 81 6.81 3
CNT30511889 Solanum lycopersicum 12:38974578-38991335 (-) noncoding (-0.0004096)- 35 6.21 3
CNT30511888 Solanum lycopersicum 12:46203996-46207598 (-) noncoding (-0.0065536)- 50 13.4 1
CNT30511887 Solanum lycopersicum 12:35878094-35884382 (+) coding (0.032)- 42 10.98 3Conserved counterparts:
CNT30511886 Solanum lycopersicum 12:59531205-59531429 (+) noncoding (-0.098304)- - 246.21 1
CNT30511885 Solanum lycopersicum 12:29868835-29870867 (-) noncoding (-0.0512)- 48 0 2
CNT30511884 Solanum lycopersicum 12:51119915-51122846 (+) noncoding (-0.0290816)- 49 10.59 2
CNT30511883 Solanum lycopersicum 12:53372571-53375561 (+) noncoding (-0.08192)- 33 2.74 2
CNT30511882 Solanum lycopersicum 12:64655253-64655831 (+) noncoding (-0.04096)- 31 22.82 2Conserved counterparts:
CNT30511881 Solanum lycopersicum 12:25665310-25665825 (+) noncoding (-0.0004096)- 62 4.29 2
CNT30511880 Solanum lycopersicum 12:35969826-35970540 (+) noncoding (-0.0196608)- 73 2049.31 2
CNT30511878 Solanum lycopersicum 12:6174393-6175993 (+) noncoding (-0.0385024)- 37 8.47 2
CNT30511877 Solanum lycopersicum 12:63633319-63688445 (+) noncoding (-0.0004096)- 41 12.38 4Conserved counterparts:
CNT30511876 Solanum lycopersicum 12:58386899-58387213 (+) noncoding (-0.0004096)- 78 53.51 1
CNT30511874 Solanum lycopersicum 12:63634577-63638910 (-) noncoding (-0.08192)- 61 2.36 2
CNT30511873 Solanum lycopersicum 12:67109248-67114902 (-) noncoding (-0.0794624)5e-38 (sp|B4FHU1|ZCIS_MAIZE) 89 15.58 3
CNT30511872 Solanum lycopersicum 12:2922945-2923595 (+) noncoding (-0.0233472)- 48 0.26 3
CNT30511871 Solanum lycopersicum 12:46295742-46296703 (+) noncoding (-0.028672)- 57 5.81 1Conserved counterparts:
CNT30511870 Solanum lycopersicum 12:7725847-7727513 (-) noncoding (-0.077824)- 81 7.91 1
CNT30511869 Solanum lycopersicum 12:34080581-34107665 (+) noncoding (-0.0004096)- - 14.29 2
CNT30511868 Solanum lycopersicum 12:3871061-3871781 (+) noncoding (-0.008192)- 46 0.49 3
CNT30511867 Solanum lycopersicum 12:48886170-48893066 (-) noncoding (-0.016384)- 34 4.5 2
CNT30511866 Solanum lycopersicum 12:67642330-67643954 (+) noncoding (-0.0909312)2e-22 (sp|Q8GXC7|FBK50_ARATH) 73 5.35 2Conserved counterparts:
CNT30511865 Solanum lycopersicum 12:12227409-12231361 (-) noncoding (-0.04096)- 30 3.1 2
CNT30511864 Solanum lycopersicum 12:18218368-18229493 (+) noncoding (-0.0004096)- 50 6.78 2
CNT30511863 Solanum lycopersicum 12:59133723-59134240 (+) noncoding (-0.0004096)0.00000000000005 (sp|P42849|UMEC_ARMRU) 47 8.33 1
CNT30511862 Solanum lycopersicum 12:3117355-3118467 (-) coding (0.041)- 55 45.99 2
CNT30511861 Solanum lycopersicum 12:1739476-1740296 (-) noncoding (-0.0290816)- - 38.09 3
CNT30511860 Solanum lycopersicum 12:48351882-48353714 (+) noncoding (-0.0372736)- 56 4.26 2
CNT30511859 Solanum lycopersicum 12:6878055-6880404 (-) noncoding (-0.004096)- 45 1.26 2
CNT30511858 Solanum lycopersicum 12:27292374-27295889 (+) noncoding (-0.028672)- 48 3.67 2
CNT30511856 Solanum lycopersicum 12:63414334-63414864 (+) noncoding (-0.024576)- 39 2.75 2
CNT30511855 Solanum lycopersicum 12:58378265-58389310 (-) noncoding (-0.069632)- 71 10.47 4
CNT30511853 Solanum lycopersicum 12:63628576-63633965 (+) noncoding (-0.0004096)- 50 9.86 3
CNT30511852 Solanum lycopersicum 12:3871057-3871819 (+) noncoding (-0.008192)- 46 2.32 2
CNT30511851 Solanum lycopersicum 12:63048811-63049931 (-) noncoding (-0.0004096)- 32 11.95 2
CNT30511850 Solanum lycopersicum 12:39466080-39468036 (+) coding (0.112)- 89 4.96 2
CNT30511849 Solanum lycopersicum 12:52243399-52245741 (-) noncoding (-0.0004096)- 52 12.61 2
CNT30511848 Solanum lycopersicum 12:2922830-2923602 (+) noncoding (-0.0438272)- 63 0 3
CNT30511846 Solanum lycopersicum 12:47425528-47428508 (-) noncoding (-0.016384)- 51 8.93 3