SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 5616 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3026496 Populus trichocarpa 17:11012548-11012901 (-) noncoding (-0.0004096)- 75 21.08 2
CNT3026494 Populus trichocarpa 17:2802014-2816904 (-) noncoding (-0.073728)- 68 24.63 2
CNT3026493 Populus trichocarpa 17:3082892-3084879 (+) noncoding (-0.0098304)2e-41 (sp|P69317|UBIQ_LUPPO) 65 0.25 4
CNT3026492 Populus trichocarpa 17:14620940-14630226 (-) noncoding (-0.0004096)4e-32 (sp|Q7XA40|RGA3_SOLBU) 53 0.8 2
CNT3026490 Populus trichocarpa 17:12312195-12323302 (-) coding (0.115)- 93 3.29 2
CNT3026488 Populus trichocarpa 17:14622800-14632506 (-) noncoding (-0.0004096)1e-26 (sp|Q7XA40|RGA3_SOLBU) 59 1.39 2
CNT3026487 Populus trichocarpa 17:12145474-12262351 (-) noncoding (-0.0004096)0.00000000000003 (sp|Q9SZ67|WRK19_ARATH) 29 6.05 3
CNT3026486 Populus trichocarpa 17:11568929-11589201 (-) noncoding (-0.0610304)1e-30 (sp|Q9SCZ4|FERON_ARATH) 32 4.47 2
CNT3026485 Populus trichocarpa 17:8908960-8945141 (-) noncoding (-0.0004096)7e-146 (sp|Q9C952|CPSF3_ARATH) 91 4.83 2
CNT3026484 Populus trichocarpa 17:2798499-2813893 (-) noncoding (-0.110592)5e-72 (sp|K7NBW3|74AC1_SIRGR) 47 0 2
CNT3026483 Populus trichocarpa 17:1214369-1253698 (-) noncoding (-0.049152)0.00000000004 (sp|Q9LRR4|R13L1_ARATH) 87 9.24 2
CNT3026482 Populus trichocarpa 17:15770288-15776529 (+) noncoding (-0.018432)2e-67 (sp|Q6H7J6|YSL14_ORYSJ) 64 15.42 2
CNT3026481 Populus trichocarpa 17:14395620-14400221 (+) noncoding (-0.0004096)- 48 8.03 2
CNT3026480 Populus trichocarpa 17:15846010-15912582 (-) noncoding (-0.06144)7e-56 (sp|C0LGP4|Y3475_ARATH) 60 1.42 2
CNT3026479 Populus trichocarpa 17:3161808-3162322 (+) noncoding (-0.0004096)- - 55.83 1
CNT3026478 Populus trichocarpa 17:597663-675866 (-) noncoding (-0.0004096)- 35 25.29 2
CNT3026477 Populus trichocarpa 17:10250494-10251271 (+) noncoding (-0.0004096)- 35 19.72 1
CNT3026476 Populus trichocarpa 17:70477-70820 (-) noncoding (-0.0004096)- 54 147.91 1
CNT3026475 Populus trichocarpa 17:1963733-1986630 (-) noncoding (-0.0004096)- 77 11.13 2
CNT3026474 Populus trichocarpa 17:13676490-13676973 (-) noncoding (-0.0004096)- 39 28.77 1
CNT3026473 Populus trichocarpa 17:12173853-12229102 (-) noncoding (-0.0004096)2e-38 (sp|V9M2S5|RPV1_VITRO) 42 1.16 3
CNT3026472 Populus trichocarpa 17:1942826-1943224 (-) noncoding (-0.0004096)- 48 5.22 1
CNT3026471 Populus trichocarpa 17:1215951-1242044 (-) noncoding (-0.02048)4e-29 (sp|Q9LRR4|R13L1_ARATH) 49 3.15 2
CNT3026470 Populus trichocarpa 17:10424876-10425355 (-) coding (0.091)0.00000000000003 (sp|P55217|CGS1_ARATH) 97 99.3 2
CNT3026469 Populus trichocarpa 17:14316903-14334343 (-) noncoding (-0.0004096)1e-61 (sp|Q7XA40|RGA3_SOLBU) 69 0.38 2
CNT3026468 Populus trichocarpa 17:12396374-12396850 (-) noncoding (-0.032768)- 70 5.67 1
CNT3026467 Populus trichocarpa 17:12234414-12261489 (-) noncoding (-0.053248)- 39 31.2 2
CNT3026466 Populus trichocarpa 17:15174110-15198171 (+) noncoding (-0.0004096)- 61 29.13 2
CNT3026465 Populus trichocarpa 17:15844233-15851719 (-) noncoding (-0.0004096)8e-32 (sp|C0LGP4|Y3475_ARATH) 51 2.98 2
CNT3026464 Populus trichocarpa 17:5434056-5442759 (+) noncoding (-0.094208)- 40 2.14 2
CNT3026463 Populus trichocarpa 17:13480502-13488469 (-) noncoding (-0.069632)1e-19 (sp|Q7XA42|RGA1_SOLBU) 93 5.22 2
CNT3026462 Populus trichocarpa 17:3082924-3084285 (+) noncoding (-0.032768)7e-160 (sp|P0CH33|UBQ11_ARATH) 62 2.71 3
CNT3026461 Populus trichocarpa 17:5621598-5622591 (-) noncoding (-0.0004096)- 57 26.98 1
CNT3026460 Populus trichocarpa 17:4670693-4677608 (-) noncoding (-0.004096)- 62 6.23 2
CNT3026459 Populus trichocarpa 17:14317727-14334908 (-) noncoding (-0.0004096)1e-21 (sp|Q7XBQ9|RGA2_SOLBU) 76 7.55 2
CNT3026457 Populus trichocarpa 17:9397370-9412789 (-) noncoding (-0.0004096)- 77 0.44 2
CNT3026456 Populus trichocarpa 17:438137-462685 (-) noncoding (-0.0004096)- 35 4.38 2
CNT3026455 Populus trichocarpa 17:10759894-10760641 (+) noncoding (-0.0004096)- 52 7.88 1
CNT3026454 Populus trichocarpa 17:683293-726951 (-) noncoding (-0.0004096)4e-29 (sp|F4KA51|LRL23_ARATH) 37 0.51 2
CNT3026453 Populus trichocarpa 17:13981305-13981879 (-) noncoding (-0.06144)- - 23.06 2
CNT3026452 Populus trichocarpa 17:1224809-1275067 (-) noncoding (-0.0004096)0.00000007 (sp|Q7XA39|RGA4_SOLBU) 45 6.52 3
CNT3026451 Populus trichocarpa 17:3082913-3084288 (+) coding (0.132)9e-160 (sp|P0CH33|UBQ11_ARATH) 95 249.93 3
CNT3026450 Populus trichocarpa 17:14182987-14185326 (-) noncoding (-0.139264)- 90 6.96 1
CNT3026449 Populus trichocarpa 17:1217120-1256216 (-) noncoding (-0.151552)- 60 17.37 2
CNT3026448 Populus trichocarpa 17:8770458-8778591 (+) noncoding (-0.045056)- 77 2.13 2
CNT3026447 Populus trichocarpa 17:15128343-15175128 (+) noncoding (-0.098304)7e-40 (sp|Q7XBQ9|RGA2_SOLBU) 71 2.53 2
CNT3026446 Populus trichocarpa 17:640305-640871 (-) noncoding (-0.0004096)- 77 6.73 2
CNT3026445 Populus trichocarpa 17:15061487-15199363 (+) noncoding (-0.155648)4e-83 (sp|Q7XA42|RGA1_SOLBU) 67 0.28 5
CNT3026443 Populus trichocarpa 17:11457939-11458537 (-) noncoding (-0.0004096)- - 2.94 1
CNT3026442 Populus trichocarpa 17:12672736-12681990 (-) noncoding (-0.0004096)- 34 15.56 2