SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 8440 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3093399 Solanum tuberosum 4:1766253-1781686 (-) noncoding (-0.0126976)- 81 17.19 3
CNT3093397 Solanum tuberosum 4:32713882-32714721 (+) noncoding (-0.094208)- 34 0.42 2
CNT3093396 Solanum tuberosum 4:53330140-53331101 (-) noncoding (-0.0004096)- 38 4.18 1
CNT3093395 Solanum tuberosum 4:66335443-66341052 (-) noncoding (-0.126976)- 53 23.8 2
CNT3093394 Solanum tuberosum 4:32258214-32258864 (+) noncoding (-0.0004096)- - 16.86 2
CNT3093393 Solanum tuberosum 4:67392574-67393541 (+) noncoding (-0.0004096)- 42 5.58 2
CNT3093392 Solanum tuberosum 4:30530789-30535760 (-) noncoding (-0.098304)- 54 2.32 4
CNT3093390 Solanum tuberosum 4:64499321-64499788 (-) noncoding (-0.0004096)- 50 7.83 2
CNT3093388 Solanum tuberosum 4:59097422-59098576 (-) noncoding (-0.045056)- 31 4.04 3
CNT3093387 Solanum tuberosum 4:66380679-66409258 (-) noncoding (-0.045056)7e-142 (sp|O81832|Y4729_ARATH) 45 2.19 2
CNT3093386 Solanum tuberosum 4:7338095-7355483 (-) noncoding (-0.0004096)- 59 115.51 2
CNT3093385 Solanum tuberosum 4:35215691-35215971 (-) noncoding (-0.0004096)- 43 12.58 1
CNT3093384 Solanum tuberosum 4:4513522-4513771 (-) noncoding (-0.0004096)- - 2.78 1
CNT3093383 Solanum tuberosum 4:24230751-24231149 (+) noncoding (-0.0004096)- - 18.73 2
CNT3093382 Solanum tuberosum 4:56508008-56508785 (-) noncoding (-0.0004096)- 44 17.57 2
CNT3093381 Solanum tuberosum 4:31409282-31419453 (+) noncoding (-0.135168)- 80 5.83 2
CNT3093380 Solanum tuberosum 4:44381529-44382924 (+) noncoding (-0.049152)- 56 37.68 2
CNT3093379 Solanum tuberosum 4:25001835-25018314 (-) noncoding (-0.016384)- 81 0.74 2
CNT3093378 Solanum tuberosum 4:30530822-30535651 (-) noncoding (-0.0004096)- 57 9 4
CNT3093377 Solanum tuberosum 4:32067859-32074210 (-) noncoding (-0.0004096)- 60 8.01 2
CNT3093376 Solanum tuberosum 4:30530807-30535334 (-) noncoding (-0.098304)- 54 2.4 4
CNT3093375 Solanum tuberosum 4:8068428-8071916 (+) coding (0.001)- 71 5.85 3
CNT3093374 Solanum tuberosum 4:63481029-63483308 (+) noncoding (-0.032768)- 62 108.3 1
CNT3093373 Solanum tuberosum 4:4097157-4098325 (-) noncoding (-0.0004096)- 44 7.58 2
CNT3093372 Solanum tuberosum 4:1151157-1163561 (+) noncoding (-0.0139264)5e-17 (sp|O22259|ERF71_ARATH) - 21.8 2
CNT3093371 Solanum tuberosum 4:5111935-5152469 (-) noncoding (-0.0241664)8e-33 (sp|F4I171|MD15A_ARATH) 56 26.62 2
CNT3093369 Solanum tuberosum 4:53484124-53485423 (-) noncoding (-0.0905216)- 73 9.38 2
CNT3093368 Solanum tuberosum 4:69794277-69795018 (-) noncoding (-0.0200704)- 50 10.56 1
CNT3093367 Solanum tuberosum 4:4268007-4316058 (+) noncoding (-0.0004096)- 54 63.1 2
CNT3093366 Solanum tuberosum 4:59097214-59098621 (-) noncoding (-0.0602112)- - 2.14 3
CNT3093365 Solanum tuberosum 4:11388553-11389571 (-) noncoding (-0.07168)1e-77 (sp|Q6Z358|C3H49_ORYSJ) 50 368.47 1Conserved counterparts:
CNT3093363 Solanum tuberosum 4:34096137-34096561 (-) noncoding (-0.012288)- 52 7.95 2
CNT3093362 Solanum tuberosum 4:4051652-4052021 (+) noncoding (-0.0004096)- 46 13.04 1
CNT3093361 Solanum tuberosum 4:52534250-52536724 (-) noncoding (-0.04096)- 74 18.53 3
CNT3093359 Solanum tuberosum 4:63831006-63840605 (-) noncoding (-0.0004096)5e-29 (sp|Q9M9E7|U85A4_ARATH) - 26.72 2
CNT3093358 Solanum tuberosum 4:42124968-42131596 (-) noncoding (-0.032768)- 40 7.93 2
CNT3093357 Solanum tuberosum 4:34038620-34051093 (-) noncoding (-0.090112)- 89 3.17 3
CNT3093355 Solanum tuberosum 4:63816740-63822669 (+) noncoding (-0.0253952)- 42 3.01 2
CNT3093354 Solanum tuberosum 4:7985880-7987889 (+) noncoding (-0.14336)- - 6.22 3
CNT3093353 Solanum tuberosum 4:66880697-66888635 (+) noncoding (-0.0004096)2e-28 (sp|Q9M667|RPP13_ARATH) 41 11.46 2
CNT3093352 Solanum tuberosum 4:40197104-40211946 (-) noncoding (-0.0004096)- 41 11.01 4
CNT3093351 Solanum tuberosum 4:57715413-57735399 (+) noncoding (-0.032768)5e-17 (sp|O80777|FB126_ARATH) 56 1.41 4
CNT3093350 Solanum tuberosum 4:17715338-17735402 (-) noncoding (-0.04096)- 59 7.6 6
CNT3093349 Solanum tuberosum 4:63145786-63147116 (-) noncoding (-0.0765952)- 56 16.04 3
CNT3093348 Solanum tuberosum 4:27006375-27060148 (+) noncoding (-0.008192)- 56 82.55 3
CNT3093345 Solanum tuberosum 4:57860856-57891457 (+) noncoding (-0.0004096)- 32 30.85 2
CNT3093344 Solanum tuberosum 4:68496766-68518018 (+) noncoding (-0.0004096)- 32 71.13 2
CNT3093343 Solanum tuberosum 4:17715494-17735407 (-) noncoding (-0.022528)- 91 13.67 5
CNT3093342 Solanum tuberosum 4:53169393-53170512 (+) noncoding (-0.0057344)- 88 11.93 2
CNT3093341 Solanum tuberosum 4:63292777-63349910 (-) noncoding (-0.262144)1e-44 (sp|Q8VZG8|MIK2_ARATH) 79 36.6 2