Detailed information on CNT3099983


BLAST search results

BLAST vs Swiss-Prot:
sp|P04373|COX2_ORYSJ, E-value = 1e-64

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631488Oryza rufipogonVigna unguiculata70.982.1982.08346forward
CNT30170457Oryza rufipogonPistacia vera21.728.3587.74106forward
CNT30370833Oryza rufipogonOryza glumipatula34.8438.9100170forward

Expression of CNT3099983

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MAGSTNTPSIEYNRANDGIAMNKRMTLGNMVRIISIVVP*

>peptide 2 (32 aa)
WHAIVLLVSRRREWEMTGKPDASRTTGTFRCT*

Sequence

>CNT3099983
CTGGCATGCTATAGTTCTTTTAGTCTCTCGACGACGGGAATGGGAGATGACCGGTAAGCCAGATGCTTCGCGAACCACCGGTACATTTCGTTGCACTTAA
ATCACCCTCGTTAAGAGGCGCACTCCGATACCATTGATGTCCAATAGCTTTGATAGTAATGGCTGGATCTACTAATACCCCGTCCATTGAGTATAACAGA
GCAAACGATGGTATAGCAATGAACAAAAGAATGACACTAGGAAATATGGTCCGAATAATTTCGATAGTAGTTCCATGAACAATCCTTTGCGGGATTGGAT
TAGTTTGCTCGTTGAAATGCCATAAAGCGCGAACCAACATCCGTGATACGAAAACCAAAATCAGAATGAGGAAGAAAAAGATATCGTGATGTAAGTCAAT
GATTCCTTGCATCATAGGTGTTGCAGCGTCTTGAGATCCTAATTGCCATGGTTCCGCAGCATCACAAAGAGCGATTAGAAGAAATCGA