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Detailed information on CNT3099899


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZU9|RBOHJ_ARATH, E-value = 1e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552202Oryza rufipogonOryza glaberrima62.4460.22100389forward
CNT30574959Oryza rufipogonOryza barthii34.9968.55100218forward

Expression of CNT3099899

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MAIKADLASPSSYTLVSEELRVRQYIVITFSDIVHDSFKPLEGPLLSGHPVELCCLN*

>peptide 2 (30 aa)
MHTQVVISRCRSDGEGMPAKAGKTVRNSLR*

>peptide 3 (70 aa)
DLLTTVTAKLKIVASTMFAEKRGSPMREFLWAFAKSENTFLQLGLAKCVRICNRSIRNKRNTLEINKYFR*

Sequence

>CNT3099899
TGGATTTGTTAACAACCGTTACTGCAAAGCTCAAAATTGTTGCATCGACGATGTTCGCTGAAAAAAGAGGCTCACCTATGCGTGAGTTTTTGTGGGCATT
CGCCAAGTCAGAGAACACCTTTCTCCAGTTAGGCCTCGCAAAATGTGTGCGAATCTGCAACAGATCAATCAGAAATAAGAGGAATACACTGGAAATAAAT
AAGTATTTCAGATAGAAGAGGGGGAAGATGTCGAATACCCTGCTGCCGGAGACGATATCCACACCATTTTTGGCATGTTGAAGTGACTGAACCATGGCAA
TCAAAGCTGACCTTGCGTCGCCTTCTTCATACACGCTGGTCAGCGAAGAATTGAGAGTGAGACAGTACATTGTGATCACTTTCAGCGACATCGTTCATGA
CTCCTTTAAACCACTCGAAGGACCCTTGCTCTCTGGTCACCCAGTAGAACTGTGCTGCCTCAACTGACCTTCCCAAACAGGTTTCTGAGTTCAGTCGTCC
AGTCACCTAGTGTACGGATATGCACACTCAGGTAGTCATCTCCAGGTGCAGAAGTGATGGAGAAGGGATGCCTGCAAAGGCAGGAAAAACAGTTAGAAAT
AGTCTCAGATAAACCACATTTTG