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Detailed information on CNT3099888


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690402Oryza rufipogonOryza sativa74.1198.85100604forward
CNT30552477Oryza rufipogonOryza glaberrima53.1389.4699.54433forward
CNT30369416Oryza rufipogonOryza glumipatula49.4510098.76403forward

Expression of CNT3099888

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSKSIKTSIYMLRNIINIMDEQASNQSQTK*

Sequence

>CNT3099888
CTCACGCTGGACGGTCAACAAAAATGTGTGAATACTTTTGATTGAATAGTTTTGACTCATGCTGGACGATGAACATTAGTTAATTAAGAGTTGTTGGTTC
GTATACTGCCAAAATCTCTTCATATAGAACTATATGTCAAAATCTATCAAAACAAGCATCTATATGCTTCGCAATATCATCAACATAATGGATGAGCAAG
CAAGCAATCAATCTCAAACCAAATGAATGCCTCAACAAGCGATCAAACCTCATCTAGTGTGTAAAGCGCCCAAGGGAACTCCAGTTTAGGACAATGCAGG
CAAGAAGACCTGAAGATTGACTGCCCGTTGCTAAAAAGGAAAAAGTAACATAAAACACTGACAAGTGAAGAGCCAGGCAGAACACATTTTGATCAATATC
CAAACGGCAGCTTCTCACATAAATAAGATAACCGATAGCTCCAGGTTGAGAATCAAAAACCGAAAGAAATAGGTTCTTTGAGCAGAGTGCAGAACATAAA
CAAAAATGCCTGTTGCAAATTGCAAGACTACAGGTAAACTTAAATGCCATATGGAGTTTGTTTGGCAGCATAAGATGAAACTACTGTGATAAGGCTACTC
TCTCACTCGTCATCCTCTTCCTCGTCATCATCATCAGCACCAGCGGAGGAGTTGAGAGCATTCAATCTTTCGACGAGACTGGCCTTCCTCTGCTCGTAGG
TCAGCTTCTTGAGGGCACCAAAGACACGGTTTCCAGTGGTTGTCCTAATGAGGCCAACATCCAAGAGAGCACGGAAAGGCCGCCTTTCATCAGCTGGTTC
AACATAGTAGTCCTC