Detailed information on CNT3099864


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30509971Oryza rufipogonSolanum lycopersicum36.86.8197.6585reverse complement
CNT30715685Oryza rufipogonMalus domestica golden36.86.9895.2985forward
CNT30484250Oryza rufipogonChara braunii46.3214.7494.39107forward
CNT30644906Oryza rufipogonCannabis sativa54.9839.6989.76127forward

Expression of CNT3099864

Peptides detected in this lncRNA

>peptide 1 (53 aa)
GVLPSSRWYSASSRRIQFHRVHVGDSGAVVTPFVQINYPPRSVPPPPNDRCGG*

>peptide 2 (36 aa)
TGSYRLAVGTPHLHGEFNFTGSMSETAGQSLHHSCR*

Sequence

>CNT3099864
ACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATT
CGTGCAGATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCATCCTTAGACGAAAGAGTGGTCTTTCAGGATTGG
TCGTTGTGTGTCACCACCTCCCACCTATCCT