Detailed information on CNT3099863


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30362263Oryza rufipogonSorghum bicolor33.9115.8489.05137reverse complement
CNT30596720Oryza rufipogonOryza meridionalis32.9226.0396.99133forward
CNT30149874Oryza rufipogonBrachypodium distachyon35.6411.1788.89144reverse complement
CNT30603960Oryza rufipogonOryza punctata96.2930.7895.89389forward

Expression of CNT3099863

Peptides detected in this lncRNA

>peptide 1 (44 aa)
IRFFCKISVSSKLNLIEQVKQFYLVTKNLSPAIFSFPLFVHYIA*

Sequence

>CNT3099863
GTATCCGTTTTTTTTGCAAAATTTCTGTAAGTTCTAAATTGAACTTAATTGAACAAGTCAAGCAATTCTATTTGGTCACAAAAAATTTGTCCCCCGCCAT
ATTTTCTTTCCCTCTTTTTGTCCACTACATCGCCTGAACCTAAGCAAAAGAGGTTCAAGAGACAGACCCAAATAAAGAAGAAATAGTAATCTTTGCCGAA
TAGGAAGAAAAAAGATTCATATTTCGATACAATACAAGAAGAATCGACACAAGAAAAAGGCAAAAAAGCCTTTTTCTTGTGCCCAATAGAGGATTAAGAA
GACCAGCAATCCCTCCTAAAAGGATTTGTTCCTTTTATTGTTCTCGCCCTTGCCTTGCATTCTCCTCGTTTTGCATGAGATGATAGAAATAAGGAATTGC
AGAC