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Detailed information on CNT3099840


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689869Oryza rufipogonOryza sativa97.8486.7899.56453forward

Expression of CNT3099840

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MLCKESDVSGESAFAGEEFEEFQGQQGKSH

>peptide 2 (43 aa)
MLSQKQIEKRKRESDSSQLLSCAYFMCCLLRAYSLNSQSAIGH*

Sequence

>CNT3099840
GGTTAGTGCGTTTTGCAAATTCGCAGGCCCTATCTTGTGGTATGAACTGAGTACGCGATGATTTATCCTGCGTATTGGGGGCTTACCATAAGATAAAGCC
GTGAATTTGCAAAACGTTCAAACCCACTGAAGTGTTGTTTGAAGGTAAATATTTCGAAGGGTTCGTGAAGAAAAGGCATGTAAATATTTAGTTATTTCCC
CATGACATGCTAAGCCAGAAACAGTCTAGCTGCATGTGATATGCTCAGCCAGAAACAAATAGAAAAGAGAAAAAGAGAGAGTGACTCTTCCCAGCTTTTG
TCATGTGCATATTTCATGTGTTGTCTACTTAGAGCCTACTCGTTGAATTCGCAAAGTGCTATTGGTCACTGAAATGTTATGTAAAGAATCCGACGTTTCC
GGAGAGTCCGCTTTTGCCGGAGAAGAATTTGAAGAGTTCCAAGGCCAGCAAGGCAAGTCACAC