Detailed information on CNT3099839


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690292Oryza rufipogonOryza sativa10081.98100405forward
CNT30339348Oryza rufipogonEragrostis tef37.0411.782150forward
CNT30574954Oryza rufipogonOryza barthii83.2110096.44337forward
CNT30115665Oryza rufipogonOryza nivara88.1510099.44357forward

Expression of CNT3099839

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MNRLFSPCSVGIRREWKNVDRCVTTELERNRRAAASTSEAPSCTSSESAHACPPATTGRSRRRTGSRRCHRPPGTRTAW*

Sequence

>CNT3099839
GGCAGGTGGGGAAGGCATAACGGGATGAGGAGCTAGAGCGAACCGAAAAAGGGTGAAGCGAAGCGAAGCGGCGAGGTTTGTCCGGCCGTGATGGACCGAT
GAACAGACTCTTCTCTCCTTGTTCTGTTGGAATAAGACGCGAATGGAAGAACGTTGATCGATGTGTTACTACGGAATTGGAGCGAAATAGGCGTGCAGCG
GCCAGTACAAGCGAAGCTCCATCTTGTACGTCGTCCGAGTCCGCCCACGCGTGTCCACCGGCGACGACCGGACGTAGCCGACGGCGTACAGGAAGTCGCC
GGTGCCACCGACCACCGGGTACACGGACGGCCTGGTGATGTTGGGCGTGCCCCCGAGGATGGACACGGAGCCCCGGTATCCGCGGTGGTGGAGCGTGATC
TTGGC