Detailed information on CNT3099797


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8W3M4|Y4744_ARATH, E-value = 6e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596662Oryza rufipogonOryza meridionalis97.8641.0896.35274forward

Expression of CNT3099797

Peptides detected in this lncRNA

>peptide 1 (49 aa)
AEERRALRRPPLVGEARNAVVLDVEDAVLDQRQARRPDRREVVARQREA*

>peptide 2 (41 aa)
LRNDAHSAGRRWLAKPGMQLFLTLRTPSLISDKHAGPTDVK*

Sequence

>CNT3099797
GGCTGAGGAACGACGCGCACTCCGCCGGCCGCCGCTGGTTGGCGAAGCCCGGAATGCAGTTGTTCTTGACGTTGAGGACGCCGTCCTTGATCAGCGACAA
GCACGCCGGCCCGACCGACGTGAAGTAGTTGCTCGACAGCGTGAGGCATGAGAAGGATGACGGGATCGGGCCGGTGAGCTGGTTCATGCCGGCGTCGATC
ACTGCGGCCTTGGTGAGCATGCCGAGCTCGTGAGGAAGGCAGCCGGAGAGGTAGTTGTTCAGGAGGAGCACCTCCTGGAG