Detailed information on CNT3099760


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30151167Oryza rufipogonBrachypodium distachyon20.3412.1610071forward

Expression of CNT3099760

Peptides detected in this lncRNA

>peptide 1 (56 aa)
PSSFDMVLSTRPSILYLFTCVGLGYGQLTGRIALPIRIFSWKFQPSLTMTTVATDY*

>peptide 2 (46 aa)
RVPSTWFSRRALVYSTCSPVSVWGTVSSPGGSPSQFEFFPGSFNRR*

Sequence

>CNT3099760
GCCGAGTTCCTTCGACATGGTTCTCTCGACGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGCTCACCGGGAGGATCGCC
CTCCCAATTCGAATTTTTTCCTGGAAGTTTCAACCGTCGTTGACTATGACAACAGTCGCGACCGACTATTAAGATCCTCGCGACTATGGCAGGGCGGTAC
GCTCTGCTCTGTCGCGACCTCTACTCTAATCAAAAGACTAAAGGCCCCTACGGAAGATGAAAAAGGCGGACTTATTAGCAGATTAATAGATCATTTCGGA
ATGGGATATACATCCCATATACTGGATCAAATAAAAACGCTGGGCTTCC