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Detailed information on CNT3099755


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690405Oryza rufipogonOryza sativa59.1673.76100520forward

Expression of CNT3099755

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MAHEFYTSISQQVQPNKDQIMIIRTPFNLHHISPHNQTTYNHTKQQQN*

>peptide 2 (54 aa)
MLCSVNPQERGIGGDLFHTYCGVELFPLKSLQTPSTPSIPNKAVRGSGHSTPFE*

>peptide 3 (35 aa)
PRHTNCRDVDPNSTCGDRRHSLLLATLRLQLPRLG*

>peptide 4 (41 aa)
MVLVHGDHPLVPAEPAHLVPAERRVGVEGEVAVHPHRAGPH*

Sequence

>CNT3099755
CCACGCCACACTAACTGCCGAGATGTCGATCCCAATTCCACGTGTGGCGACCGGCGACACAGCTTGTTGCTTGCGACTCTGAGGCTGCAGCTGCCTCGCC
TCGGTTAGCTCTTGGCTCCTGCTTTCCCCCTCCTCGTCCGCTCGTCATCCTCGACTTGACCCTCGACAGTTCATCCTCAGACTGACCGTCATGCATTCGT
CCTAATGGTATTGCTCAGTATTCATTCTTGCATCTGGCTCTGGCCATTTATCAGAGAACACAATTAAAACAACTCCAGTCATACTGTTAATGCTATGTTC
GGTTAATCCCCAAGAGAGAGGGATTGGAGGGGATTTATTCCACACCTATTGTGGTGTGGAATTATTCCCCCTCAAATCCCTCCAAACCCCTTCAACCCCT
TCCATACCGAACAAGGCGGTCAGGGGCTCAGGGCACAGTACCCCGTTCGAATAATCCAACCTGCTTTGAACTTTGAGGCACATTTTGTACGATTTCAAAC
GATGGCACATGAGTTCTATACATCCATTTCTCAACAAGTTCAACCAAACAAGGATCAGATCATGATCATCAGAACCCCTTTTAATCTGCACCATATCTCA
CCCCACAACCAAACTACATACAACCACACCAAGCAGCAGCAGAATTAAGGAGAAAAACATCCGAAAACACTACACAGGCTGCAGCATTCATGGTACTTGT
CCATGGCGACCATCCCTTGGTCCCGGCCGAACCCGCTCATCTTGTACCCGCCGAACGGCGCGTCGGGGTCGAAGGCGAAGTAGCAGTTCACCCACACCGT
GCCGGCCCGCACTGACCTCGACACCATGTTGGCAATGTTGAGGTTCTTGGTCACAATGCCGGCAGCCAGCCCGTACTTG