Detailed information on CNT3099732


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000696, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689928Oryza rufipogonOryza sativa59.4362.198.28290forward
CNT30552031Oryza rufipogonOryza glaberrima56.7658.6999.28277forward
CNT30574923Oryza rufipogonOryza barthii59.4352.2598.97290forward
CNT30115624Oryza rufipogonOryza nivara56.1559.5799.27274forward

Expression of CNT3099732

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MKLFVSCGLMLASYFTAFTFTRPPPCLQETMGDPSFFSLFSFTNQIKTWIKLI*

>peptide 2 (39 aa)
MTNLWVADETFCQLRIDASILLHCFHLYKTTTLLARNHG*

>peptide 3 (30 aa)
TIRISSVDLHWSCILFRHEGGKMAVKLVTG*

Sequence

>CNT3099732
CACCATCAGGATTTCTTCAGTGGATTTACATTGGAGTTGCATTTTATTCAGGCATGAGGGGGGAAAAATGGCAGTTAAATTAGTTACAGGTTGATAGGAA
ATGGAGAGATTATTACAGGCCAAAAGATCTTATTAATCTGGCCTGTTTTACAGTTTATTTTTTTTCTTTGATGACAAATTTATGGGTGGCTGATGAAACT
TTTTGTCAGTTGCGGATTGATGCTAGCATCTTACTTCACTGCTTTCACCTTTACAAGACCACCACCCTGCTTGCAAGAAACCATGGGTGATCCTTCTTTC
TTTTCTCTTTTTTCTTTCACCAATCAGATAAAAACCTGGATCAAACTTATCTAACTCTTCAGGAAATGAGGTCATTTTCATAGTCGGCAGATTTGCAGTA
TCTCTAACGAATTCGCATCAGATTGGATGCACATCTTATGCTGAATCCCTTTACTCTCTTGTGTCCTAACCAGGTTTTGATAGGTTAA