| Target | Query species | Target species | Query coverage (%) | Target coverage (%) | Identity | Alignment length (nt) | Orientation |
| CNT30690471 | Oryza rufipogon | Oryza sativa | 33.59 | 81.99 | 100 | 214 | forward |
| CNT30552300 | Oryza rufipogon | Oryza glaberrima | 56.99 | 55.25 | 99.72 | 363 | forward |
| CNT30455220 | Oryza rufipogon | Saccharum spontaneum | 20.72 | 17.35 | 86.36 | 132 | forward |
| CNT30363793 | Oryza rufipogon | Sorghum bicolor | 20.72 | 27.79 | 84.85 | 132 | forward |
| CNT30595582 | Oryza rufipogon | Oryza meridionalis | 52.28 | 63.31 | 92.19 | 333 | forward |
| CNT30369166 | Oryza rufipogon | Oryza glumipatula | 57.93 | 71.51 | 99.73 | 369 | forward |
| CNT30574837 | Oryza rufipogon | Oryza barthii | 51.96 | 56.1 | 99.7 | 331 | forward |
| CNT30497518 | Oryza rufipogon | Digitaria exilis | 20.41 | 20.97 | 84.62 | 130 | forward |
| CNT30115618 | Oryza rufipogon | Oryza nivara | 57.93 | 71.1 | 95.12 | 369 | forward |
| CNT30557683 | Oryza rufipogon | Panicum hallii | 20.72 | 36.57 | 85.61 | 132 | forward |
>CNT3099710
ACTGAAACTTTATACTCCAGACTAATCACTATCACACTATCAGAGAGATTCAGAACAGTGATCGACCGGTGATAATTAGGACAAGCTTTATTATATTCAG
GTCACGAATTTATTTTTCATACACCCCCCTCTCCGTTCGTAGTGATCGCACAGAGAAGAAGGTGCTAATTAGCTAAGCTCCGTGTACGCACGTACACACG
CACGCACGATATACACGTAGAGCTAAGCCACCACATGACCACCACGACTACGTACGGGCACACATATACGTACGTACGTACACGGGTACACACAGCAGGT
TCGATCAGTCGGACTTGAGCAGGAAGCTCTGCTTGCGCTCGCGGAACTCGCCGGTGCAGGTGTTGAAGTAGTCGTTGCCGTGGTTGTGGTTGTGGTTGTG
GTTGTGGTGGTGGCGGCCGGAGCCGGACCTGTCGATCTCCTGGAACGTCTCCTTGACGACGTGCTGCTGCTGCACGCCGCCGCGGCCGAGGAAGCCGCCG
GTGGGGGTCACCGACCTCACCTCCTCCGAGCAGTAGTCCACCTCCTGGTAGTGAGCCATTGTTTTTTAGTTGGGGAGTGAGGTGAGGTGGTGTTGTGATG
AGCGAGAAATGGTTAATTAGGGTTTCGGTGGTGTACG