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Detailed information on CNT3099697


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523186Oryza rufipogonSetaria italica33.118.8391.03234forward
CNT30437957Oryza rufipogonAegilops tauschii20.9313.5991.89148forward
CNT30134375Oryza rufipogonLolium perenne39.8925.7590.07282forward

Expression of CNT3099697

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MTPPRPVDGSRRRSDTATPGTRAPPTLMPMSCT*

Sequence

>CNT3099697
GAATCATACTGACATGGTCAAGGAGATTTTTATAACCCATCACTTTTAACTGTTTTACAGCCTTCAACCGCCTTATCCTCAAAGCACACGGCGCTTTACA
GCATCCAAAGCTCTCTCCCTCCCTCACTCACTCGCCACCTTAATCAAACCAAACCCTTAATTAAGTACTTAATTATGACTAAACAAGGCTCACTCCCCCG
TTAATTAGATTAAGCAGCAGGCTTAAGGCGCAATTAGCTAGCATCCCTTGGGCACGAAGCCGAGGCGCTGGCCGTCGCCGTCGAACACCACGCGGAAGCC
CTGCTGCTGGATGTTCCCGATGATGGAGACGCCGCCGTCGGTGCCGGCGAACGCGAAGCAGAAGGTGCCCCTCGAGTCCACCGGGATCAGGTAGTTCTCC
GGCGGCAGCGCGGCCTCGGCGCCGCCGGCGAAGTGCATCGACACGGTGGGCACCTTCACCACCTTGAGCCCGCTCAGGTCGTAGCACGTGTCGAACAGGG
AGAACCCGCCCGGGGAGAGGCGGAGGCCCGCGGGTGACGGACGTGCCGGAGTCCACGATGACGCCGCCGCGGCCTGTGGACGGGTCCAGGCGGAGGTCGG
ACACGGCCACGCCCGGGACGCGCGCGCCGCCGACGCTGATGCCCATGAGCTGCACGTAGTAGAACGTCTCCATCCTGGGGTTCTTCACCATCGGGGTGAA
GGACGCG