Detailed information on CNT3099695


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000768, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693800Oryza rufipogonOryza sativa49.8750.7592.27983forward
CNT30553887Oryza rufipogonOryza glaberrima40.4922.0491.1798forward
CNT30596603Oryza rufipogonOryza meridionalis3.3523.0892.4266forward
CNT30371296Oryza rufipogonOryza glumipatula15.2286.2185.33300reverse complement
CNT30109097Oryza rufipogonOryza longistaminata18.8263.5397.3371forward
CNT30576375Oryza rufipogonOryza barthii45.2145.5192.7891forward
CNT30116780Oryza rufipogonOryza nivara8.4245.3693.37166forward

Expression of CNT3099695

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MCAVQAHCGYIRATTIATCLAMLRKFPMVIYDMIIILYKWDIFTQELFCCL*

>peptide 2 (34 aa)
MGIPKNLCIFTFSTAFKLFYLAGRPNYYVRPMHR*

>peptide 3 (30 aa)
MLNPIFSQVLYYFINCMRCFIKNGVLVEMT*

>peptide 4 (29 aa)
LRRRSAATIAVADRLGSSWPRHLGPPPPK*

>peptide 5 (91 aa)
MGTVVFAIWHGRLSISNITDSASLRERMCSPLGVRIRMGPTFPSGIGSWPMWRNTLRAHARLDFKQCNSFVVTSSPHSMCRVWGTDGYQNN*

>peptide 6 (68 aa)
SSPEICRHHCRRRPPRELVATPPRTASAQIEHGRANRLLPLAKVCRTKSYLRNQLSKASPIQFLLRSC*

>peptide 7 (65 aa)
MQDVRCLVTITLHRVPEFLRMVLSRVIPSRLPVWFGRWAYRRTYVSLPSPLRLNSFIWPVGLTTM*

>peptide 8 (58 aa)
MRTTYLLICQVCCMDVITMLWMRVLATDHGTSTVYAPGIREFNPRVPTCIAVIVVYTM*

Sequence

>CNT3099695
TCTTCGCCGGAGATCTGCCGCCACCATTGCCGTCGCCGACCGCCTAGGGAGCTCGTGGCCACGCCACCTCGGACCGCCTCCGCCCAAATAGAGCACGGGA
GGGCGAATCGATTGTTGCCGTTGGCGAAAGTGTGCAGGACCAAGAGTTATTTGAGGAACCAACTAAGCAAGGCAAGTCCTATTCAATTCCTCCTTCGATC
ATGTTGAATCCTATATTTTCGCAAGTGCTTTACTATTTTATAAATTGCATGCGATGTTTTATAAAAAATGGGGTATTGGTAGAAATGACCTAATTGCTGC
ATTACCTACCTTGATATATTGATTATCATTACTGTTGAAGCCCTAGGCTGAGTATATATGTGTGCTGTACAAGCACATTGTGGGTATATTCGAGCTACTA
CTATAGCTACTTGCTTAGCCATGCTTAGAAAATTTCCGATGGTTATATATGACATGATAATCATTCTTTACAAATGGGATATTTTTACACAAGAGTTGTT
CTGTTGTTTATGAAAATTGGAAACTGAAAATAATGATTTTAGACTTGGGCGGCAAGTGGTGTGCATATGGTGGTAGTTGCACACCGATAAGGGGAGTGTA
CGCCCGAGTCGATTAAGGACTGAACTATGTGTCACCAACTAAGATTACTGTGCAACCACATGTGTCGGTTATGGGGGCGACCTTGGCTTGTTAAGTTGTT
TACTGTTTAGCCTTGCATTGGGAGGCCGTTGTAGTAGGGACTAGTCTGAGCGATGGTTCATAGGATCTACCCATGTGACCCTCTATGGGAACGGTTGTGT
TCGCCATATGGCATGGGCGTCTGAGTATATCCAATATAACGGATAGTGCCTCGTTGAGGGAACGGATGTGTTCGCCTCTCGGCGTTAGGATTAGGATGGG
GCCCACCTTTCCTAGCGGCATTGGTTCATGGCCAATGTGGAGAAACACTCTCCGTGCTCATGCAAGGCTAGACTTTAAGCAATGTAACAGCTTCGTTGTG
ACCTCTAGTCCACATTCCATGTGTAGAGTGTGGGGTACCGACGGGTACCAAAACAACTAGAGTGTAGCCTTTTGGCTTCTATTACATCATGTGGGTAAAG
TTGTACAAACTCTGCAGAGTCTAAAACTAATCGATTAGCCGTGCTCATGGTCATGAGCGACTTGGTGAAATGATACAAGTATAGTGTTGGTGATTTACTA
AAATGGTTTGTGAAATGGGTATGGTGAATAATGGTGATGATTTTGCCCGGTGTGGGCTGATAATAAAATGATTACTTGTTGCCGTGGGTGGCACAAGGTT
GGTACTATGATGATACTTATATTGCTATTATTATGGCTTACTCTTTGATTTAAAAATCCCGTTTCTATCTATTATTATCTACTATTGTGAAATAAAATTT
GCCTTAAGCTGAAAATGAGCCACAAATATAGCCATCCTTGATCTCAGCTTGCAATAGTCCTAGGTTTCCCAAGGTTTGGGTAGGACTTGCCAATACCTAG
TGTATTGACCCACTTCTTGTTGTTGTTTTTAGACATGGATGCAGGATGTGAGGTGCCTAGTGACGATTACTTTGCACCGGGTACCGGAGTTTTTGAGGAT
GGTTCTTTCTAGGGTGATTCCTAGTCGGTTGCCTGTGTGGTTTGGTAGATGGGCATACCGAAGAACTTATGTATCTTTACCTTCTCCACTGCGTTTAAAC
TCTTTTATTTGGCCGGTCGGCCTAACTACTATGTAAGACCTATGCACCGTTAAGTTATGAGAACCACTTATCTACTTATATGTCAAGTATGTTGTATGGA
TGTGATAACAATGTTGTGGATGCGTGTACTAGCCACTGATCATGGGACTAGTACAGTGTACGCTCCAGGTATTCGGGAATTCAATCCCCGGGTGCCGACA
TGTATTGCCGTAATTGTTGTGTACACGATGTAAACTGTTTTGGATGTATTGAATATCCATATAAATCAATT